RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PRTGQ2VWP7 1150 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FAM214AQ32MH5 1076 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SYTL3Q4VX76 610 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ANKRD20A2Q5SQ80 823 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 WASHC2DQ5SRD0 308 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ANKRD20A1Q5TYW2 823 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ANKRD20A3Q5VUR7 823 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 KCTD11Q693B1 232 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FAAH2Q6GMR7 532 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 PRMT9Q6P2P2 845 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TMEM205Q6UW68 189 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 GK5Q6ZS86 529 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 NEK10Q6ZWH5 1172 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 NLRC3Q7RTR2 1065 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TAS2R42Q7RTR8 314 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TMTC1Q8IUR5 882 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SIAH3Q8IW03 269 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 RHOT2Q8IXI1 618 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 KATNAL2Q8IYT4 538 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 OR4N4Q8N0Y3 316 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 MMP21Q8N119 569 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 C2orf73Q8N5S3 287 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 AMER3Q8N944 861 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 MDS2Q8NDY4 140 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 PHF10Q8WUB8 498 aaKnown RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 CHTF18Q8WVB6 975 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SLC22A18Q96BI1 424 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 CDKN2AIPNLQ96HQ2 116 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 MAGED4Q96JG8 741 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 IMMP1LQ96LU5 166 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 DMRTA2Q96SC8 542 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 DNAJC7Q99615 494 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF700Q9H0M5 742 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 INTS7Q9NVH2 962 aaKnown RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 C14orf105Q9NVL8 296 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SMARCAL1Q9NZC9 954 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 STOX2Q9P2F5 926 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FEZ2Q9UHY8 353 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 AAR2Q9Y312 384 aaKnown RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 NEU2Q9Y3R4 380 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 PCDHGB6Q9Y5F9 930 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FAM169AQ9Y6X4 670 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 A0A0J9YVX5 310 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 A0A1W2PPV9 198 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 OR2A25A4D2G3 310 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 KRT87PA6NCN2 255 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 MROH6A6NGR9 719 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SPOPO43791 374 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 OR1I1O60431 355 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 MSNP26038 577 aaKnown RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 CCR7P32248 378 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ART1P52961 327 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 EMP2P54851 167 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 YBX1P67809 324 aaKnown RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 MUM1Q2TAK8 710 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ODF2Q5BJF6 829 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF766Q5HY98 468 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 UNC5DQ6UXZ4 953 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 FGD2Q7Z6J4 655 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ZC3H7AQ8IWR0 971 aaKnown RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 OR2L3Q8NG85 312 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 OR13J1Q8NGT2 312 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 HMGCLL1Q8TB92 370 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ACTL9Q8TC94 416 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 KRT35Q92764 455 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SCMH1Q96GD3 660 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SPATA13Q96N96 652 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SIGLEC12Q96PQ1 595 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 NPAS2Q99743 824 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 TRIM51Q9BSJ1 452 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 HES7Q9BYE0 225 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 TGIF2Q9GZN2 237 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 SPTLC3Q9NUV7 552 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 TNFRSF10DQ9UBN6 386 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
ATXN3-219ENST00000553488 CSPG4Q6UVK1 2322 aa6.88□□□□□ -1.31
ATXN3-219ENST00000553488 A0A0U1RQJ8 604 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CCDC162PA2VCL2 907 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 H7C0C1 242 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 PJA2O43164 708 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ZNHIT1O43257 154 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 FOXS1O43638 330 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 OR56A5P0C7T3 313 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TPH1P17752 444 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CXCR2P25025 360 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 SLC26A3P40879 764 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 BDKRB1P46663 353 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ATP5OP48047 213 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CSE1LP55060 971 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms