RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 KATNA1O75449 491 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 CREG1O75629 220 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 ITGB2P05107 769 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 C1GALT1C1LP0DN25 315 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 EPORP19235 508 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 ALAS2P22557 587 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 CXCR2P25025 360 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 SLCO1A2P46721 670 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 PIK3CGP48736 1102 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 NFKB2Q00653 900 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 RHDQ02161 417 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 PWP1Q13610 501 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 PCBP2Q15366 365 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 TBCCQ15814 346 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 PFKFB4Q16877 469 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 TMEM214Q6NUQ4 689 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 COX15Q7KZN9 410 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.15□□□□□ -0.622e-7■■■■■ 102.3
TRAFD1-209ENST00000552896 KRT78Q8N1N4 520 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 ZNF740Q8NDX6 193 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 TTLQ8NG68 377 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 NT5CQ8TCD5 201 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 ESAMQ96AP7 390 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 PTCD3Q96EY7 689 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 CATSPER2Q96P56 530 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 EFCAB11Q9BUY7 163 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 SLC26A1Q9H2B4 701 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 NT5DC2Q9H857 520 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 TCFL5Q9UL49 500 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 CDC14AQ9UNH5 594 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 FARSAQ9Y285 508 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 TNPO3Q9Y5L0 923 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.63
TRAFD1-209ENST00000552896 PCSK5Q92824 1860 aa11.15□□□□□ -0.63
TRAFD1-209ENST00000552896 DOCK10Q96BY6 2186 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 KALRNO60229 2985 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 GLRA3O75311 464 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 ALBP02768 609 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 EPB42P16452 691 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 KRT15P19012 456 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 FBLP22087 321 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 CASP2P42575 452 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 RPS18P62269 152 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 RGS1Q08116 209 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 IFFO1Q0D2I5 559 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 LAPTM5Q13571 262 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 IL10RAQ13651 578 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 DSG2Q14126 1118 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 SLBPQ14493 270 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC9A5Q14940 896 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 UGT8Q16880 541 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 XKR6Q5GH73 641 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 PAGE2BQ5JRK9 111 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 TMIGD1Q6UXZ0 262 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 DTWD1Q8N5C7 304 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 METTL27Q8N6F8 245 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 PTGR2Q8N8N7 351 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 ANKRD53Q8N9V6 530 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 TRPV3Q8NET8 790 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 OR2Y1Q8NGV0 311 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 OR2W6PQ8NHA6 318 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC13A3Q8WWT9 602 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 ROPN1BQ9BZX4 212 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF304Q9HCX3 659 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC22A11Q9NSA0 550 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 CTSFQ9UBX1 484 aa11.14□□□□□ -0.63
TRAFD1-209ENST00000552896 TLN1Q9Y490 2541 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ATRXP46100 2492 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 IGLV3-12A0A075B6K2 115 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 A8MT66 165 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 H0YIG0 161 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 E2F3O00716 465 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 NKX2-8O15522 239 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 FOXS1O43638 330 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 UGDHO60701 494 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 PRAMEF4O60810 478 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 CNOT3O75175 753 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 H2AFYO75367 372 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 KLF7O75840 302 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 NSA2O95478 260 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 STATHP02808 62 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SERPINA6P08185 405 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 RPS17P08708 135 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SBK3P0C264 359 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 PRKAR1AP10644 381 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 CD22P20273 847 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 EEF1DP29692 281 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SERPINB1P30740 379 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 FOLR3P41439 243 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SKP1P63208 163 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 IRF8Q02556 426 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 CHIT1Q13231 466 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 DOC2AQ14183 400 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms