RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 THAP11Q96EK4 314 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 PRAP1Q96NZ9 151 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 DMRTA2Q96SC8 542 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 NPAS2Q99743 824 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 OLFM1Q99784 485 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 TMEM184CQ9NVA4 438 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 MAP1AP78559 2803 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 SPG11Q96JI7 2443 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 FOXO6A8MYZ6 492 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 GOLGA8KD6RF30 607 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 GOLGA8TH3BQL2 631 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 SGK494L7N484 410 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 NDC80O14777 642 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 ZBTB14O43829 449 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 SLC25A12O75746 678 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 NEURL1O76050 574 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 OGNP20774 298 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 IL10P22301 178 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 ARNTP27540 789 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 HSF1Q00613 529 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 SNX1Q13596 522 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 KCNJ11Q14654 390 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 USP10Q14694 798 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 C4orf22Q6V702 233 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 C3P1Q6ZMU1 363 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 PRSS41Q7RTY9 318 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 VN1R4Q7Z5H5 301 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 MFSD3Q96ES6 412 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 TREX2Q9BQ50 279 aaPredicted RBP13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 KIFC1Q9BW19 673 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 FAM129AQ9BZQ8 928 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 CCDC177Q9NQR7 707 aaPredicted RBP13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 GALPQ9UBC7 116 aa13.35□□□□□ -0.27
CHMP1A-210ENST00000551981 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 NME2P1O60361 137 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 MAN1A2O60476 641 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 RDH16O75452 317 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ENO3P13929 434 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 PAMP19021 973 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 NME2P22392 152 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 MGAT1P26572 445 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ST13P50502 369 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 CLCN7P51798 805 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 RAD9BQ6WBX8 426 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 LRRC56Q8IYG6 542 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 PLPP5Q8NEB5 264 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ASB11Q8WXH4 323 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 OR1F2PQ96R84 312 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 INTS10Q9NVR2 710 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 SYBUQ9NX95 663 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 KLHL42Q9P2K6 505 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ASB1Q9Y576 335 aa13.34□□□□□ -0.27
CHMP1A-210ENST00000551981 ADAM10O14672 748 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 TFECO14948 347 aaPredicted RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC35G6P0C7Q6 338 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 MPC1LP0DKB6 136 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 GRK3P35626 688 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SKIV2L2P42285 1042 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CYB561P49447 251 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 OR4D2P58180 307 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC26A5P58743 744 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SNRPNP63162 240 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SKP1P63208 163 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 RHAGQ02094 409 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 KIAA0930Q6ICG6 404 aaPredicted RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 ASPGQ86U10 573 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CILP2Q8IUL8 1156 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CHERPQ8IWX8 916 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CPSF7Q8N684 471 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 ASB5Q8WWX0 329 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 PEX11GQ96HA9 241 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CCDC68Q9H2F9 335 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SOX13Q9UN79 622 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 NAALAD2Q9Y3Q0 740 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC22A7Q9Y694 548 aa13.33□□□□□ -0.28
CHMP1A-210ENST00000551981 CTAGE9A4FU28 777 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms