RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 TMEM119Q4V9L6 283 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 CEP55Q53EZ4 464 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 SPDYCQ5MJ68 293 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ETFRF1Q6IPR1 90 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 RAB12Q6IQ22 244 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 KDM7AQ6ZMT4 941 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 SPATA19Q7Z5L4 167 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ZNF589Q86UQ0 364 aaPredicted RBP3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TRIM74Q86UV6 250 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TRIM73Q86UV7 250 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 CHSY1Q86X52 802 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 C4orf19Q8IY42 314 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 NAT8LQ8N9F0 302 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 BOLLQ8N9W6 283 aaKnown RBP3.65□□□□□ -1.83
LIMA1-208ENST00000551691 MCPH1Q8NEM0 835 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 OR10S1Q8NGN2 331 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 HM13Q8TCT9 377 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TRPC4APQ8TEL6 797 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 PPP4R1Q8TF05 950 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 SLC35F5Q8WV83 523 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ROBO4Q8WZ75 1007 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ESR2Q92731 530 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TMEM18Q96B42 140 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 PDLIM2Q96JY6 352 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 RITA1Q96K30 269 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 CABS1Q96KC9 395 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 AK8Q96MA6 479 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 UROC1Q96N76 676 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 MS4A10Q96PG2 267 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 CYP2S1Q96SQ9 504 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 INTS14Q96SY0 518 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TMEM79Q9BSE2 394 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 GPR88Q9GZN0 384 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ECT2Q9H8V3 914 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 OLAHQ9NV23 265 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 TMEM45AQ9NWC5 275 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ASB6Q9NWX5 421 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 FBXL5Q9UKA1 691 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 CPSF3Q9UKF6 684 aaKnown RBP3.65□□□□□ -1.83
LIMA1-208ENST00000551691 MMP17Q9ULZ9 603 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 SNX7Q9UNH6 387 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 KCNK7Q9Y2U2 307 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 LIPGQ9Y5X9 500 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 ZMYM6O95789 1325 aa3.65□□□□□ -1.83
LIMA1-208ENST00000551691 MYH9P35579 1960 aaKnown RBP3.64□□□□□ -1.83
LIMA1-208ENST00000551691 TRBV5-7A0A0A0MS05 114 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 IGKV6-21A0A0C4DH24 114 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 WIPF3A6NGB9 483 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 CCDC69A6NI79 296 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 C2CD4BA6NLJ0 364 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 STMND1H3BQB6 276 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 INO80B-WBP1J3KQ70 363 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PGRMC2O15173 223 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ZBTB14O43829 449 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 KLK8O60259 260 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 CLDN1O95832 211 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 GBAP04062 536 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 DDX5P17844 614 aaKnown RBP3.64□□□□□ -1.83
LIMA1-208ENST00000551691 GABRG2P18507 467 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ACADLP28330 430 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 NMT1P30419 496 aaKnown RBP3.64□□□□□ -1.83
LIMA1-208ENST00000551691 TNFSF8P32971 234 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 AVPR1AP37288 418 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 OPRD1P41143 372 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 UQCRFS1P47985 274 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ME1P48163 572 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PRKCEQ02156 737 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 RBPJQ06330 500 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 FOXM1Q08050 763 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 FAM27E3Q08E93 113 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 RPA4Q13156 261 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 TUBB2AQ13885 445 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ZNF273Q14593 569 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PTPRCAPQ14761 206 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ANKRD20A4Q4UJ75 823 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 KRTCAP3Q53RY4 240 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ANKRD20A8PQ5CZ79 823 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ANKRD20A2Q5SQ80 823 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 C6orf10Q5SRN2 563 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ANKRD20A1Q5TYW2 823 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ANKRD20A3Q5VUR7 823 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 SHEQ5VZ18 495 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 SLC8B1Q6J4K2 584 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PLA2G4DQ86XP0 818 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 TIGD4Q8IY51 512 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PEX5LQ8IYB4 626 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ELMOD1Q8N336 334 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 MAB21L3Q8N8X9 362 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 STKLD1Q8NE28 680 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 EXD1Q8NHP7 514 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 LRRC15Q8TF66 581 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 LINC00476Q8WZB0 136 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 ERGIC1Q969X5 290 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 LINC00615Q96LM1 132 aaPredicted RBP3.64□□□□□ -1.83
LIMA1-208ENST00000551691 RUNDC3BQ96NL0 473 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 SEMA3CQ99985 751 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 FAM118BQ9BPY3 351 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 PIMREGQ9BSJ6 248 aa3.64□□□□□ -1.83
LIMA1-208ENST00000551691 MLPHQ9BV36 600 aaPredicted RBP3.64□□□□□ -1.83
LIMA1-208ENST00000551691 TUBB2BQ9BVA1 445 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms