RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ZC3H7AQ8IWR0 971 aaKnown RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 REXO1L1PQ8IX06 675 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 SIRT6Q8N6T7 355 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 DNAJB8Q8NHS0 232 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 ZNF480Q8WV37 535 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 FAM136AQ96C01 138 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 MMABQ96EY8 250 aaPredicted RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 MAGEB10Q96LZ2 347 aaPredicted RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 TAAR6Q96RI8 345 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 PKP4Q99569 1192 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 TUBB6Q9BUF5 446 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 YIPF2Q9BWQ6 316 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 ABI3Q9P2A4 366 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 GALPQ9UBC7 116 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 TEKT2Q9UIF3 430 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 KLF2Q9Y5W3 355 aaPredicted RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 ANKRD12Q6UB98 2062 aa7.21□□□□□ -1.25
NEK3-201ENST00000550331 KCNE1BA0A087WTH5 132 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 A0A0A6YYC8 382 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 FAM237BA0A1B0GVD1 139 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 TCRBV7S3A2A0A539 114 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 MAGEB16A2A368 324 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 OR5H15A6NDH6 313 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 GOLGA6L6A8MZA4 724 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 I3L1I5 382 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 GFYI3L273 518 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 FFAR3O14843 346 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 GPR42O15529 346 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ZBTB14O43829 449 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 PRAMEF2O60811 474 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 RASAL1O95294 804 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 NSA2O95478 260 aaKnown RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 WDPCPO95876 746 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 FGGP02679 453 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 UQCRHP07919 91 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 MPC1LP0DKB6 136 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ITGAMP11215 1152 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 MLNP12872 115 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 SKIV2L2P42285 1042 aaKnown RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 AVPR1BP47901 424 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 KCNJ1P48048 391 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 KCNK10P57789 538 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 TSTA3Q13630 321 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 LONRF1Q17RB8 773 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 THEMIS2Q5TEJ8 643 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ABHD17BQ5VST6 288 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 PLAG1Q6DJT9 500 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 FAAH2Q6GMR7 532 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 HIBCHQ6NVY1 386 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 MTFR2Q6P444 385 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 GFRALQ6UXV0 394 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ZNF662Q6ZS27 426 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ADCK2Q7Z695 626 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 LMNTD2Q8IXW0 634 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 LRRC56Q8IYG6 542 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 PRELID2Q8N945 189 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 PPFIBP2Q8ND30 876 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 GIMAP7Q8NHV1 300 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 SUN3Q8TAQ9 357 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 MCOLN3Q8TDD5 553 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 METTL21AQ8WXB1 218 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 ASB11Q8WXH4 323 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 IMMP1LQ96LU5 166 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 KRTAP4-5Q9BYR2 181 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 FAM129AQ9BZQ8 928 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEK3-201ENST00000550331 CCDC68Q9H2F9 335 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 PLA2G3Q9NZ20 509 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 SAMD15Q9P1V8 674 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 COPG2Q9UBF2 871 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 C19orf25Q9UFG5 118 aaPredicted RBP7.21□□□□□ -1.26
NEK3-201ENST00000550331 RNF112Q9ULX5 631 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 MED16Q9Y2X0 877 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 COMMD10Q9Y6G5 202 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 DCHS2Q6V1P9 2916 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 NUP210LQ5VU65 1888 aa7.21□□□□□ -1.26
NEK3-201ENST00000550331 CTAGE9A4FU28 777 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 SDR42E2A6NKP2 422 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 EIF3FO00303 357 aaPredicted RBP7.2□□□□□ -1.26
NEK3-201ENST00000550331 HAT1O14929 419 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 P2RX6O15547 441 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 KIF5CO60282 957 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 DIAPH2O60879 1101 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 AVILO75366 819 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 UNC5CO95185 931 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 SYF2O95926 243 aaKnown RBP7.2□□□□□ -1.26
NEK3-201ENST00000550331 CELA2AP08217 269 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 SNRPB2P08579 225 aaKnown RBP7.2□□□□□ -1.26
NEK3-201ENST00000550331 IMPA1P29218 277 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 CA7P43166 264 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 AGTR2P50052 363 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 EFNA3P52797 238 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 RPS15AP62244 130 aaKnown RBP7.2□□□□□ -1.26
NEK3-201ENST00000550331 TBPL1P62380 186 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 MAT1AQ00266 395 aaKnown RBP7.2□□□□□ -1.26
NEK3-201ENST00000550331 RBPJQ06330 500 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 ZNF33BQ06732 778 aa7.2□□□□□ -1.26
NEK3-201ENST00000550331 GPS1Q13098 491 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms