RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 RBCK1Q9BYM8 510 aa11.86□□□□□ -0.51
LETMD1-222ENST00000550274 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
LETMD1-222ENST00000550274 FBXO6Q9NRD1 293 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-222ENST00000550274 INTS10Q9NVR2 710 aaKnown RBP11.86□□□□□ -0.51
LETMD1-222ENST00000550274 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-222ENST00000550274 ITGB1BP2Q9UKP3 347 aa11.86□□□□□ -0.51
LETMD1-222ENST00000550274 ASPDHA6ND91 283 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 NPIPA5E9PKD4 350 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 TTI1O43156 1089 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 RDH16O75452 317 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 MPC1LP0DKB6 136 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 AGAP20933 346 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 BCL6P41182 706 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 KIR3DL1P43629 444 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 SMSP52788 366 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 TBPL1P62380 186 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CDK16Q00536 496 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 ALDH6A1Q02252 535 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CTBP1Q13363 440 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 PTK6Q13882 451 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 MEP1AQ16819 746 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 MEI1Q5TIA1 1274 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 C4orf22Q6V702 233 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 PIWIL4Q7Z3Z4 852 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 SIAH3Q8IW03 269 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CPNE9Q8IYJ1 553 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 KCT2Q8NC54 265 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 CD200R1Q8TD46 325 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 MTFMTQ96DP5 389 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
LETMD1-222ENST00000550274 TMEM184CQ9NVA4 438 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 GUCA1BQ9UMX6 200 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 NPIPA1Q9UND3 350 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 MEMO1Q9Y316 297 aa11.85□□□□□ -0.51
LETMD1-222ENST00000550274 KCNE1BA0A087WTH5 132 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 FEZF1A0PJY2 475 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 ZNF860A6NHJ4 632 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 GABRR3A8MPY1 467 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 ZBTB14O43829 449 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 KIF5CO60282 957 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 CDC123O75794 336 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 NEURL1O76050 574 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 CLDN14O95500 239 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 PAMP19021 973 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 VPS41P49754 854 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 AGTR2P50052 363 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 HSF1Q00613 529 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 RHAGQ02094 409 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 RPS6KA1Q15418 735 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 TRIP13Q15645 432 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 EXT1Q16394 746 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 KRTCAP3Q53RY4 240 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 SFT2D3Q587I9 215 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 ANKRD22Q5VYY1 191 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 PAPD4Q6PIY7 484 aaKnown RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 MBOAT1Q6ZNC8 495 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 GALNTL5Q7Z4T8 443 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 PCGF5Q86SE9 256 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 CHERPQ8IWX8 916 aaKnown RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 M1APQ8TC57 530 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 KCNJ9Q92806 393 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 TSLPQ969D9 159 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 GPR21Q99679 349 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 TRIM51Q9BSJ1 452 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 TSGA10Q9BZW7 698 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 MMP25Q9NPA2 562 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-222ENST00000550274 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 KLHL42Q9P2K6 505 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 DHRS7Q9Y394 339 aa11.84□□□□□ -0.51
LETMD1-222ENST00000550274 ZCWPW2A0A1B0GU75 182 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 CTAGE9A4FU28 777 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 LCMT2O60294 686 aaKnown RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 FGGP02679 453 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 CD46P15529 392 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 SLC1A2P43004 574 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 OC90Q02509 493 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 USP10Q14694 798 aaKnown RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 ABRAXAS2Q15018 415 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 NSDHLQ15738 373 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 ZNF468Q5VIY5 522 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 C3P1Q6ZMU1 363 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-222ENST00000550274 ASPGQ86U10 573 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 SLC26A11Q86WA9 606 aa11.83□□□□□ -0.52
LETMD1-222ENST00000550274 KIF2BQ8N4N8 673 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms