RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 IGSF5Q9NSI5 407 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 MKS1Q9NXB0 559 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
NUP188-211ENST00000550219 HS3ST3B1Q9Y662 390 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 LRRK2Q5S007 2527 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 CCDC189A1A4V9 331 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 HYKKA2RU49 373 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 PRICKLE3O43900 615 aaPredicted RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 KLHL2O95198 593 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 MED26O95402 600 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 ALBP02768 609 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 LTA4HP09960 611 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 KRT4P19013 534 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 GMPRP36959 345 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 IRF9Q00978 393 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 ELOAQ14241 798 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 FASTKQ14296 549 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 YOD1Q5VVQ6 348 aaPredicted RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 SUSD1Q6UWL2 747 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 PIWIL4Q7Z3Z4 852 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 TBC1D1Q86TI0 1168 aaPredicted RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 CUZD1Q86UP6 607 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 EXOC3L1Q86VI1 746 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 PLD6Q8N2A8 252 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 MAGEC3Q8TD91 643 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 ASB11Q8WXH4 323 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 ZBTB9Q96C00 473 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 NXNL1Q96CM4 212 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 LINGO1Q96FE5 620 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 WDR77Q9BQA1 342 aaPredicted RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 VPS11Q9H270 941 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 WDR54Q9H977 334 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 CUEDC1Q9NWM3 386 aaPredicted RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 SPATA7Q9P0W8 599 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 NXT1Q9UKK6 140 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 NTNG1Q9Y2I2 539 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 COPG1Q9Y678 874 aaKnown RBP12.78□□□□□ -0.36
NUP188-211ENST00000550219 PCM1Q15154 2024 aa12.78□□□□□ -0.36
NUP188-211ENST00000550219 LOC105369274A0A096LPK9 316 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 A0A1W2PPV9 198 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ANKUB1A6NFN9 424 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 GFYI3L273 518 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 GOLGA8RI6L899 631 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 FFAR3O14843 346 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 GPR42O15529 346 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 FKBP9O95302 570 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 GSTA1P08263 222 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 CD1DP15813 335 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 CREB1P16220 341 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 FBLP22087 321 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 CMPK1P30085 196 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 CRHR1P34998 444 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 YBX1P67809 324 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 CSHL1Q14406 222 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 FAM214AQ32MH5 1076 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 TTMPQ5BVD1 217 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 KIRREL2Q6UWL6 708 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 IGFL3Q6UXB1 125 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 Q6ZS92 163 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 RNF44Q7L0R7 432 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ISCA2Q86U28 154 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 SRRM1Q8IYB3 904 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 OR4N4Q8N0Y3 316 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 MYO1HQ8N1T3 1032 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 BANPQ8N9N5 519 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 OR2A1Q8NGT9 310 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 KCTD4Q8WVF5 259 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 KIAA1191Q96A73 305 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ZUFSPQ96AP4 578 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ALKBH8Q96BT7 664 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 THOC3Q96J01 351 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ZNF285Q96NJ3 590 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 MESP1Q9BRJ9 268 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 DPH7Q9BTV6 452 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 SLC26A1Q9H2B4 701 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 CENPHQ9H3R5 247 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ZNF304Q9HCX3 659 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 SSU72Q9NP77 194 aaKnown RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 DCDC2Q9UHG0 476 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 ERRFI1Q9UJM3 462 aaPredicted RBP12.77□□□□□ -0.37
NUP188-211ENST00000550219 IKZF3Q9UKT9 509 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
NUP188-211ENST00000550219 CCDC88CQ9P219 2028 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 FITM1A5D6W6 292 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ARHGEF33A8MVX0 844 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 TARM1B6A8C7 271 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 SLC16A5O15375 505 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ZBTB14O43829 449 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms