RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 METTL21AQ8WXB1 218 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 TM4SF19Q96DZ7 209 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 LMF1Q96S06 567 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 VN1R1Q9GZP7 353 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 ANKHQ9HCJ1 492 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 AGPAT4Q9NRZ5 378 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 IKZF3Q9UKT9 509 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 LOC102723996A0A087X1L8 192 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 FAM95CA0A1B0GW59 222 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 PCDH17O14917 1159 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 RDH16O75452 317 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 SERPINA7P05543 415 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 ENO2P09104 434 aaPredicted RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 SLC35G6P0C7Q6 338 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 ZNF37AP17032 561 aaPredicted RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 TSFMP43897 325 aaKnown RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 XCR1P46094 333 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 CCR8P51685 355 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 ELOAQ14241 798 aaKnown RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 ZNF460Q14592 562 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 TMEM207Q6UWW9 146 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 CAPN12Q6ZSI9 719 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 MFSD9Q8NBP5 474 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 OR51Q1Q8NH59 317 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 ATL1Q8WXF7 558 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 PSMF1Q92530 271 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 FBXL8Q96CD0 374 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 OR4K3Q96R72 315 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 ZNF700Q9H0M5 742 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 PLA2G3Q9NZ20 509 aa15.45■□□□□ 0.06
VPS29-207ENST00000549970 UTP20O75691 2785 aaKnown RBP15.45■□□□□ 0.06
VPS29-207ENST00000549970 IGHV3-20A0A0C4DH32 117 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 DYTNA2CJ06 578 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 NPEPPSL1A6NEC2 478 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 OR2W5A6NFC9 320 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 ZNF860A6NHJ4 632 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 E7ESA3 106 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 NDUFS4O43181 175 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 OR1F1O43749 312 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 WFS1O76024 890 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 F10P00742 488 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 SERPIND1P05546 499 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 ITGAMP11215 1152 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 SOX11P35716 441 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 CATSPEREQ5SY80 951 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 B3GNTL1Q67FW5 361 aaPredicted RBP15.44■□□□□ 0.06
VPS29-207ENST00000549970 SBSNQ6UWP8 590 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 RIPOR1Q6ZS17 1223 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 LANCL3Q6ZV70 420 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 ZC3HC1Q86WB0 502 aaKnown RBP15.44■□□□□ 0.06
VPS29-207ENST00000549970 PDSS2Q86YH6 399 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 ZBED8Q8IZ13 594 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 ABHD11Q8NFV4 315 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 GRHL3Q8TE85 626 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 SLC5A11Q8WWX8 675 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 PDLIM5Q96HC4 596 aaKnown RBP15.44■□□□□ 0.06
VPS29-207ENST00000549970 TSNARE1Q96NA8 513 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 BARD1Q99728 777 aaKnown RBP15.44■□□□□ 0.06
VPS29-207ENST00000549970 RBCK1Q9BYM8 510 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 FAM129AQ9BZQ8 928 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 SPNS1Q9H2V7 528 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 MOCS1Q9NZB8 636 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 RNF14Q9UBS8 474 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 NAALAD2Q9Y3Q0 740 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 SVILO95425 2214 aa15.44■□□□□ 0.06
VPS29-207ENST00000549970 CDC7O00311 574 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 PIAS1O75925 651 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 SEC24DO94855 1032 aaPredicted RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 TAS2R39P59534 338 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 CSHL1Q14406 222 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 PPP1R3AQ16821 1122 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 HIST2H2BCQ6DN03 193 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 NKAPQ8N5F7 415 aaKnown RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 ZNF740Q8NDX6 193 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 OR4K1Q8NGD4 311 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 OR1N1Q8NGS0 311 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 NEIL2Q969S2 332 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 MOCOSQ96EN8 888 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 CYTH2Q99418 400 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 TUBB6Q9BUF5 446 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 DPH5Q9H2P9 285 aa15.43■□□□□ 0.06
VPS29-207ENST00000549970 PLEKHB1Q9UF11 243 aaPredicted RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 C19orf25Q9UFG5 118 aaPredicted RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 ERRFI1Q9UJM3 462 aaPredicted RBP15.43■□□□□ 0.06
VPS29-207ENST00000549970 TRBC2A0A5B9 178 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 A1L4Q6 167 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 NDC80O14777 642 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 CDC123O75794 336 aaPredicted RBP15.42■□□□□ 0.06
VPS29-207ENST00000549970 ICAM2P13598 275 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 AP2B1P63010 937 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 HERC3Q15034 1050 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 FAM180AQ6UWF9 173 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 CPEB2Q7Z5Q1 589 aaKnown RBP15.42■□□□□ 0.06
VPS29-207ENST00000549970 TMPRSS11BQ86T26 416 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 THOC6Q86W42 341 aaKnown RBP15.42■□□□□ 0.06
VPS29-207ENST00000549970 TBC1D19Q8N5T2 526 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 BBOF1Q8ND07 529 aa15.42■□□□□ 0.06
VPS29-207ENST00000549970 ST6GALNAC3Q8NDV1 305 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms