RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 RERGQ96A58 199 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-220ENST00000549686 HBEGFQ99075 208 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 MAP3K3Q99759 626 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 MS4A8Q9BY19 250 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 FAM86C1Q9NVL1 165 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 SIRT5Q9NXA8 310 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ASIC5Q9NY37 505 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 PILRAQ9UKJ1 303 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 KLHL20Q9Y2M5 609 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ARID1BQ8NFD5 2236 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 SLC9B1P1A6NJY1 282 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 DLL1O00548 723 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 LCMT2O60294 686 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 SEC22BO75396 215 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 MYO1DO94832 1006 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 IDO1P14902 403 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 ST6GAL1P15907 406 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 GFERP55789 205 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 HMGCS1Q01581 520 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 RGS1Q08116 209 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 ILKQ13418 452 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 ZIC1Q15915 447 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 CACHD1Q5VU97 1274 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 KHDRBS2Q5VWX1 349 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 FBXO42Q6P3S6 717 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 FAM92BQ6ZTR7 304 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 VN1R5Q7Z5H4 357 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 ASPGQ86U10 573 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 MTDHQ86UE4 582 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 CPSF7Q8N684 471 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 CAMKVQ8NCB2 501 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 OR4D9Q8NGE8 314 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 CREB3L4Q8TEY5 395 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 OR2A5Q96R48 311 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 PDE7BQ9NP56 450 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 PARD6AQ9NPB6 346 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 TMEM45AQ9NWC5 275 aa16.64■□□□□ 0.25
LETMD1-220ENST00000549686 NOP53Q9NZM5 478 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 EIF3LQ9Y262 564 aaKnown RBP16.64■□□□□ 0.25
LETMD1-220ENST00000549686 CUL9Q8IWT3 2517 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 ADAMTS9Q9P2N4 1935 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 URADA6NGE7 173 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 EBAG9O00559 213 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 FCHO1O14526 889 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 TXNDC9O14530 226 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 SRPX2O60687 465 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-220ENST00000549686 CTSVO60911 334 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 RASSF9O75901 435 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 ANKRD34CP0C6C1 535 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 SLC35G6P0C7Q6 338 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 PVRP15151 417 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 NCF2P19878 526 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-220ENST00000549686 TGM1P22735 817 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 CSF2RBP32927 897 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 MRPL19P49406 292 aaKnown RBP16.63■□□□□ 0.25
LETMD1-220ENST00000549686 ARL4DP49703 201 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 STX1BP61266 288 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 STXBP1P61764 594 aaKnown RBP16.63■□□□□ 0.25
LETMD1-220ENST00000549686 TGM3Q08188 693 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 ACSM2AQ08AH3 577 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 GALNTL6Q49A17 601 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 DEPDC1Q5TB30 811 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 FAM91A1Q658Y4 838 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 ACSM2BQ68CK6 577 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 USP53Q70EK8 1073 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 PLD3Q8IV08 490 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 NT5CQ8TCD5 201 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 SLC13A3Q8WWT9 602 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 FCRL1Q96LA6 429 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 NLNQ9BYT8 704 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 SAR1AQ9NR31 198 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
LETMD1-220ENST00000549686 RUVBL1Q9Y265 456 aaKnown RBP16.63■□□□□ 0.25
LETMD1-220ENST00000549686 PCM1Q15154 2024 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 COL5A1P20908 1838 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 USP34Q70CQ2 3546 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 C4orf47A7E2U8 309 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 ZSCAN9O15535 394 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 NDUFS4O43181 175 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 TGFB1P01137 390 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 PRPS2P11908 318 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 MLLT3P42568 568 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 TSFMP43897 325 aaKnown RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 RPL38P63173 70 aaKnown RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 CYP4F2P78329 520 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 CCL7P80098 99 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 HSD11B2P80365 405 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 CFHR1Q03591 330 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 CYP4F3Q08477 520 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 TBL3Q12788 808 aaKnown RBP16.62■□□□□ 0.25
LETMD1-220ENST00000549686 SQLEQ14534 574 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 KIAA0040Q15053 153 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
LETMD1-220ENST00000549686 TMTC4Q5T4D3 741 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms