RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 THEMIS2Q5TEJ8 643 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CAPN13Q6MZZ7 669 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TMEM71Q6P5X7 295 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 AGTRAPQ6RW13 159 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SUSD1Q6UWL2 747 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 DGLUCYQ7Z3D6 616 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TMPRSS12Q86WS5 348 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CARFQ8N187 725 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TCAIMQ8N3R3 496 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 GALNT15Q8N3T1 639 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 C2orf73Q8N5S3 287 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 LMNTD1Q8N9Z9 388 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 PPFIBP2Q8ND30 876 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RCBTB1Q8NDN9 531 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 FLVCR1-AS1Q8TAF5 88 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 UBTD2Q8WUN7 234 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SLC22A18Q96BI1 424 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ZBTB9Q96C00 473 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RHBDF1Q96CC6 855 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 PGM2Q96G03 612 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 PPM1MQ96MI6 270 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 OR2A14Q96R47 310 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SMC6Q96SB8 1091 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 MRPL57Q9BQC6 102 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TMEM79Q9BSE2 394 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ACAT2Q9BWD1 397 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SGPP1Q9BX95 441 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 IQCGQ9H095 443 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ATG10Q9H0Y0 220 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 STMN4Q9H169 189 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CD274Q9NZQ7 290 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CPSF2Q9P2I0 782 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 PDP2Q9P2J9 529 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TAC3Q9UHF0 121 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 LAMA5O15230 3695 aa6.09□□□□□ -1.44
PRKDC-211ENST00000546304 SDK2Q58EX2 2172 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ZFHX4Q86UP3 3567 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 MAP1BP46821 2468 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 IGHV5-51A0A0C4DH38 117 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 FAM149AA5PLN7 773 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ISM1B1AKI9 464 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 HGSO14964 777 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 TOX3O15405 576 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 KIF1CO43896 1103 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SMIM24O75264 130 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 WDR47O94967 919 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 FKBP9O95302 570 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 HPXP02790 462 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 IMPDH2P12268 514 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 MTHFD2P13995 350 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PVRP15151 417 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ST6GAL1P15907 406 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 MAGP20916 626 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 OAS2P29728 719 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PRDX3P30048 256 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SLC6A12P48065 614 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 LSSP48449 732 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ALDH18A1P54886 795 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 NFKB2Q00653 900 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SLC18A2Q05940 514 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ZFP36L1Q07352 338 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 NAE1Q13564 534 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 NAA25Q14CX7 972 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 C16orf72Q14CZ0 275 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ZXDCQ2QGD7 858 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PTCHD3Q3KNS1 767 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 FBXO48Q5FWF7 155 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 CACHD1Q5VU97 1274 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ICE2Q659A1 982 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SULT1C3Q6IMI6 304 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 CDHR3Q6ZTQ4 885 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SH2D5Q6ZV89 423 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 LRRC70Q7Z2Q7 622 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 KLHDC8AQ8IYD2 350 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 LRRC56Q8IYG6 542 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 FBXO39Q8N4B4 442 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 CHCHD4Q8N4Q1 142 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PTGR2Q8N8N7 351 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 BANPQ8N9N5 519 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 OR2L3Q8NG85 312 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 OR2A1Q8NGT9 310 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 OR56A3Q8NH54 315 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PYCR2Q96C36 320 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 LIN37Q96GY3 246 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SLC41A2Q96JW4 573 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 MAP3K3Q99759 626 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 STRADBQ9C0K7 418 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 PCBD2Q9H0N5 130 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 CNOT10Q9H9A5 744 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 VIPAS39Q9H9C1 493 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SLC6A20Q9NP91 592 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ABCF3Q9NUQ8 709 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 INTS7Q9NVH2 962 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SOHLH2Q9NX45 425 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SIDT1Q9NXL6 827 aaKnown RBP6.08□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM216Q9P0N5 145 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 EMCNQ9ULC0 261 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms