RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 URADA6NGE7 173 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 USP27XA6NNY8 438 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 CYSRT1A8MQ03 144 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 SGK494L7N484 410 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 TTI1O43156 1089 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 OR1F1O43749 312 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 LCMT2O60294 686 aaKnown RBP8.85□□□□□ -0.99
YBX3-218ENST00000546298 GUCA1CO95843 209 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 STATHP02808 62 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 EDN3P14138 238 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 SAT1P21673 171 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 AHRP35869 848 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 SLC12A2P55011 1212 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PER3P56645 1201 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 ACTN3Q08043 901 aaPredicted RBP8.85□□□□□ -0.99
YBX3-218ENST00000546298 RGS1Q08116 209 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 CALCOCO2Q13137 446 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PCOLCEQ15113 449 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 EXT1Q16394 746 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 STRA8Q7Z7C7 330 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 ZC3HC1Q86WB0 502 aaKnown RBP8.85□□□□□ -0.99
YBX3-218ENST00000546298 SIRT6Q8N6T7 355 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 KCT2Q8NC54 265 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 FBXO36Q8NEA4 188 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PLPP5Q8NEB5 264 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 CATSPER1Q8NEC5 780 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 TRPV3Q8NET8 790 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 OR4K1Q8NGD4 311 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 SLC5A11Q8WWX8 675 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PSMF1Q92530 271 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 CDKL2Q92772 493 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PYCR2Q96C36 320 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PWWP2AQ96N64 755 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 OR1F2PQ96R84 312 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 MACROD1Q9BQ69 325 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 AIF1LQ9BQI0 150 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 MESP1Q9BRJ9 268 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 TRIM51Q9BSJ1 452 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 PLAC1Q9HBJ0 212 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 ASH1LQ9NR48 2969 aaKnown RBP8.85□□□□□ -0.99
YBX3-218ENST00000546298 OLAHQ9NV23 265 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 STMN3Q9NZ72 180 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 MOCS1Q9NZB8 636 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 HCN3Q9P1Z3 774 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 ABI3Q9P2A4 366 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 TXNDC16Q9P2K2 825 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 SLC17A6Q9P2U8 582 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 ZFP69BQ9UJL9 534 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 DOPEY2Q9Y3R5 2298 aa8.85□□□□□ -0.99
YBX3-218ENST00000546298 FAM95CA0A1B0GW59 222 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 WIPF3A6NGB9 483 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 MAGEB17A8MXT2 336 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 E7ESA3 106 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 EIF3HO15372 352 aaKnown RBP eCLIP8.84□□□□□ -0.99
YBX3-218ENST00000546298 NDUFS4O43181 175 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 H2AFYO75367 372 aaKnown RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 RDH16O75452 317 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 JRKO75564 520 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 CRYABP02511 175 aaKnown RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 SERPIND1P05546 499 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ZNF37AP17032 561 aaPredicted RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 ALOX12P18054 663 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 JAK1P23458 1154 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 HNMTP50135 292 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 TNFSF10P50591 281 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 CDKL1Q00532 357 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 MEF2AQ02078 507 aaPredicted RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 CBLBQ13191 982 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 NSDHLQ15738 373 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 BTBD16Q32M84 506 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 PLAG1Q6DJT9 500 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 FRA10AC1Q70Z53 315 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ABHD13Q7L211 337 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 MAATS1Q7Z4T9 603 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ADAMTSL2Q86TH1 951 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 THOC6Q86W42 341 aaKnown RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ZBED8Q8IZ13 594 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 M1APQ8TC57 530 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 NT5CQ8TCD5 201 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 PYROXD1Q8WU10 500 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 TSPAN17Q96FV3 270 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ZNF354BQ96LW1 612 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 MAGEB10Q96LZ2 347 aaPredicted RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 KRT12Q99456 494 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 LPAR4Q99677 370 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 OLFM1Q99784 485 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 EGFL8Q99944 293 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 RHOJQ9H4E5 214 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 PELI2Q9HAT8 420 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 POPDC3Q9HBV1 291 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 PLA2G3Q9NZ20 509 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 CTNNAL1Q9UBT7 734 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 ERRFI1Q9UJM3 462 aaPredicted RBP8.84□□□□□ -0.99
YBX3-218ENST00000546298 SH2B3Q9UQQ2 575 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 NTNG1Q9Y2I2 539 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 SNX24Q9Y343 169 aa8.84□□□□□ -0.99
YBX3-218ENST00000546298 NAALAD2Q9Y3Q0 740 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms