RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DRC3Q9H069 523 aa15.54■□□□□ 0.08
LIMS2-217ENST00000545738 AKIRIN1Q9H9L7 192 aaPredicted RBP15.54■□□□□ 0.08
LIMS2-217ENST00000545738 ZFP69BQ9UJL9 534 aa15.54■□□□□ 0.08
LIMS2-217ENST00000545738 RARRES3Q9UL19 164 aa15.54■□□□□ 0.08
LIMS2-217ENST00000545738 TIMM22Q9Y584 194 aa15.54■□□□□ 0.08
LIMS2-217ENST00000545738 AP1M2Q9Y6Q5 423 aa15.54■□□□□ 0.08
LIMS2-217ENST00000545738 FITM1A5D6W6 292 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 CDRT15L2A8MXV6 281 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 H0YIV9 168 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 NDUFS4O43181 175 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 BRINP1O60477 761 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 NPHS1O60500 1241 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 OR2B3O76000 313 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 ETHE1O95571 254 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 ESRRBO95718 433 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 MLYCDO95822 493 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 B3GALT4O96024 378 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 NTRK1P04629 796 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 CAPN1P07384 714 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 ARL1P40616 181 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-217ENST00000545738 ITGA1P56199 1179 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 BST1Q10588 318 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 IL11RAQ14626 422 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 RTP5Q14D33 572 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 CLEC6AQ6EIG7 209 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 PRSS41Q7RTY9 318 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 CUZD1Q86UP6 607 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 CSNK1A1LQ8N752 337 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 MTERF1Q99551 399 aaKnown RBP15.53■□□□□ 0.08
LIMS2-217ENST00000545738 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-217ENST00000545738 NRSN2Q9GZP1 204 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 KLHL31Q9H511 634 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 AKAP7Q9P0M2 348 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-217ENST00000545738 MSRB2Q9Y3D2 182 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 NEUROG3Q9Y4Z2 214 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 APC2O95996 2303 aa15.53■□□□□ 0.08
LIMS2-217ENST00000545738 ZSCAN9O15535 394 aaPredicted RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 ZNF749O43361 778 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SRPX2O60687 465 aaPredicted RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SH3BGRLO75368 114 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SERPINE1P05121 402 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 ITGAXP20702 1163 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SERPINB3P29508 390 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 HNRNPH1P31943 449 aaKnown RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 GRK3P35626 688 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 HNF4AP41235 474 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 MED27Q6P2C8 311 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 ASPGQ86U10 573 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 HUS1BQ8NHY5 278 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 AGR3Q8TD06 166 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 ZNF473Q8WTR7 871 aaKnown RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SLC13A3Q8WWT9 602 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 MTFMTQ96DP5 389 aaKnown RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 CNDP1Q96KN2 507 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 TAAR9Q96RI9 348 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 RHBGQ9H310 441 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 NT5DC2Q9H857 520 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 DHCR7Q9UBM7 475 aaKnown RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 TRPS1Q9UHF7 1281 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 ZDHHC2Q9UIJ5 367 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 TMEM184BQ9Y519 407 aaPredicted RBP15.52■□□□□ 0.08
LIMS2-217ENST00000545738 PCDHGA3Q9Y5H0 932 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 PTGDR2Q9Y5Y4 395 aa15.52■□□□□ 0.08
LIMS2-217ENST00000545738 SCRG1O75711 98 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 PCNAP12004 261 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 SLC5A2P31639 672 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 AHRP35869 848 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 DDX39BQ13838 428 aaKnown RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 TIPARPQ7Z3E1 657 aaKnown RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 KRT78Q8N1N4 520 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 DDA1Q9BW61 102 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 SLC6A16Q9GZN6 736 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 MAGEB17A8MXT2 336 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 MAP3K7O43318 606 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 H2AFYO75367 372 aaKnown RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 DXOO77932 396 aaKnown RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 KIAA0754O94854 1291 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 SERPIND1P05546 499 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 PKNOX1P55347 436 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 RAB15P59190 212 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 SHC2P98077 582 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 LAPTM5Q13571 262 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 UGT3A2Q3SY77 523 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 PAGE2BQ5JRK9 111 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 DCAF12Q5T6F0 453 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 LCN10Q6JVE6 187 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 TMEM214Q6NUQ4 689 aaKnown RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 IGF2-ASQ6U949 168 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 PDSS2Q86YH6 399 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 TMEM151BQ8IW70 566 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 N4BP2L2Q92802 583 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 RERGQ96A58 199 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-217ENST00000545738 TUBB1Q9H4B7 451 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 FANCEQ9HB96 536 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 DMRT3Q9NQL9 472 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 SERTAD3Q9UJW9 196 aa15.51■□□□□ 0.07
LIMS2-217ENST00000545738 FOXS1O43638 330 aa15.5■□□□□ 0.07
LIMS2-217ENST00000545738 DNAJB6O75190 326 aa15.5■□□□□ 0.07
LIMS2-217ENST00000545738 SNNO75324 88 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms