RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GNG14A0A1W2PPG7 69 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 A0A1W2PRU2 124 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 M0R082 166 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 SAP18O00422 153 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 SCAMP2O15127 329 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 OLFM2O95897 454 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MPC1LP0DKB6 136 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ETFAP13804 333 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MAGP20916 626 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 CRATP43155 626 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 CRISP3P54108 245 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ATN1P54259 1190 aaPredicted RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 CYP4F2P78329 520 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MSANTD1Q6ZTZ1 278 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 SLC5A8Q8N695 610 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MCFD2Q8NI22 146 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 PHF10Q8WUB8 498 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 HPS1Q92902 700 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MIR1-1HGQ9H1L0 117 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 MTG2Q9H4K7 406 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ABCB10Q9NRK6 738 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 RAD18Q9NS91 495 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ATAD3AQ9NVI7 634 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 KLHL42Q9P2K6 505 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 CCL26Q9Y258 94 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 RUVBL1Q9Y265 456 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 TRIM43BA6NCK2 446 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 DBTP11182 482 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 POU2F1P14859 743 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 HOXB6P17509 224 aaKnown RBP15.23■□□□□ 0.03
LDLR-204ENST00000545707 GADD45AP24522 165 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 GRK5P34947 590 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 DGKEP52429 567 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 PTPN5P54829 565 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ZNF385BQ569K4 471 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 PLEKHS1Q5SXH7 462 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 IER5LQ5T953 404 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 LIPJQ5W064 366 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 TTC23LQ6PF05 361 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 AGTRAPQ6RW13 159 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 HRASLS5Q96KN8 279 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 SIGLEC11Q96RL6 698 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 C19orf43Q9BQ61 176 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 CHST8Q9H2A9 424 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 GPATCH2Q9NW75 528 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 NDUFAF4Q9P032 175 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 OSGIN1Q9UJX0 560 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 PLXNB3Q9ULL4 1909 aa15.23■□□□□ 0.03
LDLR-204ENST00000545707 C1orf226A1L170 272 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 NPIPB8E9PQR5 432 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 J3KTA2 159 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 TNFRSF11BO00300 401 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 AQP9O43315 295 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 TSPAN6O43657 245 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 SLC16A8O95907 504 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 HLA-EP13747 358 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 IDSP22304 550 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 PBLDP30039 288 aaPredicted RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 SEPHS1P49903 392 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 CTSCP53634 463 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 AP1S2P56377 157 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 RPS3AP61247 264 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 MC1RQ01726 317 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 CSTF3Q12996 717 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 RAB33AQ14088 237 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 VEZF1Q14119 521 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 COLEC12Q5KU26 742 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 NCCRP1Q6ZVX7 275 aaPredicted RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 HTR3DQ70Z44 454 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 OTOP2Q7RTS6 562 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 TMEM25Q86YD3 366 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 OR4A15Q8NGL6 344 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 HUS1BQ8NHY5 278 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 C11orf24Q96F05 449 aaPredicted RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 DACH2Q96NX9 599 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 PITX2Q99697 317 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 NIPSNAP1Q9BPW8 284 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 BCL7BQ9BQE9 202 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 CCNB1IP1Q9NPC3 277 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 GPR83Q9NYM4 423 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 EXO1Q9UQ84 846 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 PPIL1Q9Y3C6 166 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 LYVE1Q9Y5Y7 322 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 LOC100506127A0A0U1RQW1 187 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 PRAMEF25A6NGN4 478 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 AIREO43918 545 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 RFPL2O75678 378 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 PDHA2P29803 388 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 CDH12P55289 794 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 RPS13P62277 151 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 FAM180BQ6P0A1 224 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 PLEKHG7Q6ZR37 379 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 NPAS3Q8IXF0 933 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 UTP15Q8TED0 518 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 ASZ1Q8WWH4 475 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 MRPS31Q92665 395 aaKnown RBP15.22■□□□□ 0.03
LDLR-204ENST00000545707 HTRA1Q92743 480 aa15.22■□□□□ 0.03
LDLR-204ENST00000545707 POP5Q969H6 163 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms