RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DENND4CQ5VZ89 1909 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 PLXNA2O75051 1894 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 IGLV3-16A0A075B6K0 115 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ZW10O43264 779 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CCNKO75909 580 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CLDN7O95471 211 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CPSF4O95639 269 aaKnown RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 PTHP01270 115 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ITGA2P17301 1181 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CYP2A7P20853 494 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TCEA1P23193 301 aaKnown RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 MZF1P28698 734 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 TIE1P35590 1138 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 HNF1BP35680 557 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ALDH9A1P49189 494 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SELENOWP63302 87 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 KCNC3Q14003 757 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 ZXDCQ2QGD7 858 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 PTCHD3Q3KNS1 767 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RSBN1Q5VWQ0 802 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 FUT10Q6P4F1 479 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 C17orf99Q6UX52 265 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 NLRP8Q86W28 1048 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ADGRG2Q8IZP9 1017 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 VPS37AQ8NEZ2 397 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ST13P5Q8NFI4 369 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 CAPSLQ8WWF8 208 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ASB11Q8WXH4 323 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TTPALQ9BTX7 342 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 DUSP26Q9BV47 211 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 KLF16Q9BXK1 252 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 EBPLQ9BY08 206 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RACGAP1Q9H0H5 632 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 OR51E2Q9H255 320 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SPATA6Q9NWH7 488 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 MARCH5Q9NX47 278 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TMEM161AQ9NX61 479 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 FBXL12Q9NXK8 326 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 GPR83Q9NYM4 423 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ZNF226Q9NYT6 803 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 NDUFAF4Q9P032 175 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 VPS29Q9UBQ0 182 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ZNF282Q9UDV7 671 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 ZNF221Q9UK13 617 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CCDC88CQ9P219 2028 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 ARRDC5A6NEK1 342 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TMEM229AB2RXF0 380 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SEPT4O43236 478 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 IDH3BO43837 385 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 NBNO60934 754 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 C1QCP02747 245 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 STSP08842 583 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 OR56A5P0C7T3 313 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 PIPP12273 146 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 CCR7P32248 378 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RCVRNP35243 200 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SLC15A1P46059 708 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TUFMP49411 452 aaKnown RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 ST3GAL4Q11206 333 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RGNQ15493 299 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 MICAQ29983 383 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 IFI44LQ53G44 452 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 PLEKHS1Q5SXH7 462 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■■□ 26.1
TDP1-204ENST00000545686 MFSD14CQ5VZR4 134 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RETSATQ6NUM9 610 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 KRT73Q86Y46 540 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 NPAS3Q8IXF0 933 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CLECL1Q8IZS7 167 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SLC5A8Q8N695 610 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 OR6F1Q8NGZ6 308 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 C17orf50Q8WW18 174 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CXorf40BQ96DE9 158 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 C11orf24Q96F05 449 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 COPS8Q99627 209 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 SLC30A2Q9BRI3 323 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CHCHD6Q9BRQ6 235 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 TP63Q9H3D4 680 aaPredicted RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 BRF2Q9HAW0 419 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 RAD18Q9NS91 495 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 IMPAD1Q9NX62 359 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 VPS4AQ9UN37 437 aa8.44□□□□□ -1.06
TDP1-204ENST00000545686 WBP11Q9Y2W2 641 aaKnown RBP8.44□□□□□ -1.06
TDP1-204ENST00000545686 PDZK1P1A8MUH7 402 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 GFYI3L273 518 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CCRL2O00421 344 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 GFRA2O00451 464 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 TBL1XO60907 577 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 UGT2B17O75795 530 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TRAPPC2P0DI81 140 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TRAPPC2BP0DI82 140 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CD72P21854 359 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CST5P28325 142 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 NR4A2P43354 598 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms