RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DSTNP60981 165 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TLE2Q04725 743 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ACVR1Q04771 509 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 RAB33AQ14088 237 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GANABQ14697 944 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 PON2Q15165 354 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CYBRD1Q53TN4 286 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 LCN1P1Q5VSP4 162 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 HMBOX1Q6NT76 420 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SHQ1Q6PI26 577 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 FAM131AQ6UXB0 335 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 RD3Q7Z3Z2 195 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ZNF655Q8N720 491 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC43A3Q8NBI5 491 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC5A11Q8WWX8 675 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CRELD1Q96HD1 420 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ZNF514Q96K75 400 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 IGFLR1Q9H665 355 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GPN1Q9HCN4 374 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 ITM2CQ9NQX7 267 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 FARSBQ9NSD9 589 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 EDDM13A0A1B0GTR0 161 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 FAM240BA0A1B0GVZ2 78 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PI15O43692 258 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CLPXO76031 633 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 HSD3B1P14060 373 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 HSD3B2P26439 372 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ALDH4A1P30038 563 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SDC2P34741 201 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GGT5P36269 586 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 ETV3P41162 512 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 APLP1P51693 650 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CASP9P55211 416 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CDKL4Q5MAI5 379 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PRAMEF13Q5VWM6 474 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC8B1Q6J4K2 584 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 XKRXQ6PP77 449 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS50-220ENST00000544910 SPRED1Q7Z699 444 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 STX12Q86Y82 276 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 DTWD1Q8N5C7 304 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 NATD1Q8N6N6 113 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CNIH3Q8TBE1 160 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC22A17Q8WUG5 538 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 UBTD2Q8WUN7 234 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 HSPBAP1Q96EW2 488 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CCDC3Q9BQI4 270 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 MCMBPQ9BTE3 642 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC12A9Q9BXP2 914 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GORASP2Q9H8Y8 452 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PDFQ9HBH1 243 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PCDHGB3Q9Y5G1 929 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 OR7A17O14581 309 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 OR1F1O43749 312 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 LEFTY1O75610 366 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 DNAJB5O75953 348 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 C6orf47O95873 294 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TGFB1P01137 390 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TLX1P31314 330 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 FEN1P39748 380 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 PIK3CBP42338 1070 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 RFX3P48380 749 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CCR8P51685 355 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 CLCN7P51798 805 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 PPIGQ13427 754 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS50-220ENST00000544910 TIGD6Q17RP2 521 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 GET4Q7L5D6 327 aaPredicted RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 ARMC8Q8IUR7 673 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 LGI4Q8N135 537 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SLC35G5Q96KT7 338 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 SMIM14Q96QK8 99 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 TDP1Q9NUW8 608 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 IMP3Q9NV31 184 aaKnown RBP5.6□□□□□ -1.51
VPS50-220ENST00000544910 ABCD2Q9UBJ2 740 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 MLXQ9UH92 298 aa5.6□□□□□ -1.51
VPS50-220ENST00000544910 C7orf72A4D263 438 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 NPIPB15A6NHN6 443 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF701M0R085 212 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 ECDO95905 644 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 IFNA7P01567 189 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 IGLV3-27P01718 113 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 APODP05090 189 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 KLK1P06870 262 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CD36P16671 472 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RCVRNP35243 200 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PREPP48147 710 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 HEPACAMQ14CZ8 416 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ATP13A5Q4VNC0 1218 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 BHLHA9Q7RTU4 235 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RETREG3Q86VR2 466 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 SLC34A3Q8N130 599 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 OR52L1Q8NGH7 329 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 OR5AK3PQ8NH89 298 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 NETO1Q8TDF5 533 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 IRF7Q92985 503 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TMIGD2Q96BF3 282 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 NTMT1Q9BV86 223 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 BHLHE41Q9C0J9 482 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms