RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 VARSP26640 1264 aaKnown RBP12.47□□□□□ -0.41
CIT-214ENST00000544588 GP5P40197 560 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 HNF4AP41235 474 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 MAGEA4P43358 317 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
CIT-214ENST00000544588 RGS1Q08116 209 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 Q0VFX4 171 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 UBAP2LQ14157 1087 aaKnown RBP12.47□□□□□ -0.41
CIT-214ENST00000544588 SBSNQ6UWP8 590 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 TMPRSS11BQ86T26 416 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 ZC3H7AQ8IWR0 971 aaKnown RBP12.47□□□□□ -0.41
CIT-214ENST00000544588 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 IQCKQ8N0W5 287 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 Q8NA96 180 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 ZNF740Q8NDX6 193 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 ABHD11Q8NFV4 315 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 FBXO25Q8TCJ0 367 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 NEIL2Q969S2 332 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
CIT-214ENST00000544588 CPNE1Q99829 537 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 FAM129AQ9BZQ8 928 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 PTGFRNQ9P2B2 879 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 OARD1Q9Y530 152 aa12.47□□□□□ -0.41
CIT-214ENST00000544588 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 RDH16O75452 317 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 KLHL18O94889 574 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 WDR47O94967 919 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 GSTA2P09210 222 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 CCDC166P0CW27 439 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 C8orf89P0DMQ9 161 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 STMN1P16949 149 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 SPRP35270 261 aaPredicted RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 GDF5P43026 501 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 XCR1P46094 333 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 C18orf21Q32NC0 220 aaPredicted RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 C8orf74Q6P047 294 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 NXPE4Q6UWF7 544 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 ISLR2Q6UXK2 745 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 RAPH1Q70E73 1250 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 ADAMTSL2Q86TH1 951 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 GPSM1Q86YR5 675 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 FBF1Q8TES7 1133 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 ANKRD7Q92527 254 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 MOCOSQ96EN8 888 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 C19orf60Q96EN9 201 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 PEX11GQ96HA9 241 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 MAGEB10Q96LZ2 347 aaPredicted RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 WDR77Q9BQA1 342 aaPredicted RBP12.46□□□□□ -0.41
CIT-214ENST00000544588 AIF1LQ9BQI0 150 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 RBCK1Q9BYM8 510 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 NAALAD2Q9Y3Q0 740 aa12.46□□□□□ -0.41
CIT-214ENST00000544588 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 IGHV3-20A0A0C4DH32 117 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 ESYT3A0FGR9 886 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 OR2W5A6NFC9 320 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 FAM159BA6NKW6 160 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 CDC123O75794 336 aaPredicted RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 FAM155BO75949 473 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 COX6A1P12074 109 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 STX2P32856 288 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 HNMTP50135 292 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 GPX6P59796 221 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 OLR1P78380 273 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 ARG2P78540 354 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 PWP1Q13610 501 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 SLMAPQ14BN4 828 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 HERC3Q15034 1050 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 PPP1R3AQ16821 1122 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 KBTBD12Q3ZCT8 623 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 DEFB134Q4QY38 66 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 GRTP1Q5TC63 336 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 CUZD1Q86UP6 607 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 SHISA5Q8N114 240 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 SIRT6Q8N6T7 355 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 OR4K1Q8NGD4 311 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 BRIX1Q8TDN6 353 aaKnown RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 CCT6BQ92526 530 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 EXT2Q93063 718 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 SNRNP40Q96DI7 357 aaKnown RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 CYTH2Q99418 400 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 RBBP8Q99708 897 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 VN1R1Q9GZP7 353 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 DERL2Q9GZP9 239 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 SPNS1Q9H2V7 528 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 POPDC3Q9HBV1 291 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 ASF1BQ9NVP2 202 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms