RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ALAS2P22557 587 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 RPS15P62841 145 aaKnown RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 HYAL2Q12891 473 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 OVCH1Q7RTY7 1134 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 SYVN1Q86TM6 617 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 ADAMTS17Q8TE56 1095 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 CREB3L4Q8TEY5 395 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 SLC13A3Q8WWT9 602 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 MOCOSQ96EN8 888 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 PTCD3Q96EY7 689 aaKnown RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 C1QTNF3Q9BXJ4 246 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 CPSF2Q9P2I0 782 aaKnown RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 OPTCQ9UBM4 332 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 TCFL5Q9UL49 500 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 ZNF490Q9ULM2 529 aaPredicted RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 TNPO3Q9Y5L0 923 aaKnown RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 SCN3AQ9NY46 2000 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 C9J4A7 227 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 CLGNO14967 610 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SIX3O95343 332 aaPredicted RBP18.18■□□□□ 0.5
DDX55-211ENST00000544429 TBX6O95947 436 aaPredicted RBP18.18■□□□□ 0.5
DDX55-211ENST00000544429 FURINP09958 794 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 CXCR2P25025 360 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 GSTM2P28161 218 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 OR1D4P47884 311 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
DDX55-211ENST00000544429 CYP4F2P78329 520 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 MC1RQ01726 317 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 CDC20Q12834 499 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 DSG2Q14126 1118 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 DOC2AQ14183 400 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SLBPQ14493 270 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDX55-211ENST00000544429 TMIGD1Q6UXZ0 262 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 AFAP1L2Q8N4X5 818 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 TBC1D19Q8N5T2 526 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 PTGR2Q8N8N7 351 aaPredicted RBP18.18■□□□□ 0.5
DDX55-211ENST00000544429 AMER3Q8N944 861 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SNX31Q8N9S9 440 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 KCT2Q8NC54 265 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SCYL1Q96KG9 808 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 MACROD1Q9BQ69 325 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 EFCAB11Q9BUY7 163 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SLC6A16Q9GZN6 736 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 DRC3Q9H069 523 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 WDR54Q9H977 334 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 IFT80Q9P2H3 777 aaPredicted RBP18.18■□□□□ 0.5
DDX55-211ENST00000544429 DCDC2Q9UHG0 476 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 EMCNQ9ULC0 261 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 LHX6Q9UPM6 363 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SLC22A7Q9Y694 548 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 PCSK5Q92824 1860 aa18.18■□□□□ 0.5
DDX55-211ENST00000544429 SMIM23A6NLE4 172 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 VSTM2BA6NLU5 285 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 STATHP02808 62 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 CD63P08962 238 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SLC35G6P0C7Q6 338 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SMIM10L1P0DMW3 83 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 PIM1P11309 404 aaPredicted RBP18.17■□□□□ 0.5
DDX55-211ENST00000544429 EPB42P16452 691 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SLC18A2Q05940 514 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 CHIT1Q13231 466 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 IL10RAQ13651 578 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 UGT8Q16880 541 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 XKR6Q5GH73 641 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 VN1R5Q7Z5H4 357 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.17■□□□□ 0.5
DDX55-211ENST00000544429 IQCKQ8N0W5 287 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 TEX9Q8N6V9 391 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 TRPV3Q8NET8 790 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 TTC9Q92623 222 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SMIM10Q96HG1 83 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 SPSB2Q99619 263 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 AICDAQ9GZX7 198 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 RHBGQ9H310 441 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 ZNF304Q9HCX3 659 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 WDR70Q9NW82 654 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 NDOR1Q9UHB4 597 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 PCTPQ9UKL6 214 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 CDC14AQ9UNH5 594 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 NUP210LQ5VU65 1888 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 IGSF10Q6WRI0 2623 aa18.17■□□□□ 0.5
DDX55-211ENST00000544429 FAM208BQ5VWN6 2430 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 A8MT66 165 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 H0YIG0 161 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 NDUFS4O43181 175 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 SMIM24O75264 130 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 GLRA3O75311 464 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 H2AFYO75367 372 aaKnown RBP18.16■□□□□ 0.5
DDX55-211ENST00000544429 KATNA1O75449 491 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 NSA2O95478 260 aaKnown RBP18.16■□□□□ 0.5
DDX55-211ENST00000544429 ITGB2P05107 769 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 SERPINA6P08185 405 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 RPS17P08708 135 aaKnown RBP18.16■□□□□ 0.5
DDX55-211ENST00000544429 KRT15P19012 456 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 CRHR1P34998 444 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 SLC9A5Q14940 896 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 NKG7Q16617 165 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 NDUFA9Q16795 377 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms