RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 OR2A25A4D2G3 310 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 ITGAXP20702 1163 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 MAGP20916 626 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 EPHA8P29322 1005 aaPredicted RBP29.13■■■□□ 2.25
CCM2-219ENST00000544363 CLDN8P56748 225 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 KHDRBS2Q5VWX1 349 aaKnown RBP29.13■■■□□ 2.25
CCM2-219ENST00000544363 PRR23BQ6ZRT6 265 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 METTL4Q8N3J2 472 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 CLHC1Q8NHS4 586 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 CREB3L4Q8TEY5 395 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 ZBTB18Q99592 522 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 NDUFAF1Q9Y375 327 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 AP1M2Q9Y6Q5 423 aa29.13■■■□□ 2.25
CCM2-219ENST00000544363 SAP18O00422 153 aaKnown RBP29.12■■■□□ 2.25
CCM2-219ENST00000544363 SEMA3DO95025 777 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 KRT16P08779 473 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 HOXB3P14651 431 aaPredicted RBP29.12■■■□□ 2.25
CCM2-219ENST00000544363 ART3Q13508 389 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 HLA-BQ31612 363 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 FIGLAQ6QHK4 219 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 ARL10Q8N8L6 244 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 MFSD9Q8NBP5 474 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 GLB1L3Q8NCI6 653 aaPredicted RBP29.12■■■□□ 2.25
CCM2-219ENST00000544363 ZUFSPQ96AP4 578 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 TSSK3Q96PN8 268 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 RAB3IPQ96QF0 476 aaPredicted RBP29.12■■■□□ 2.25
CCM2-219ENST00000544363 CAPN10Q9HC96 672 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 FSCN3Q9NQT6 498 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 PCDHGA4Q9Y5G9 962 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 A0A0J9YY10 115 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 A0A1W2PP18 115 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 DYTNA2CJ06 578 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 TIA1P31483 386 aaKnown RBP eCLIP29.12■■■□□ 2.25
CCM2-219ENST00000544363 COMMD6Q7Z4G1 85 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 DSELQ8IZU8 1212 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 UTP4Q969X6 686 aaKnown RBP29.12■■■□□ 2.25
CCM2-219ENST00000544363 AHSPQ9NZD4 102 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 POMT2Q9UKY4 750 aa29.12■■■□□ 2.25
CCM2-219ENST00000544363 CCDC154A6NI56 674 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 ANGPT2O15123 496 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 DFNA5O60443 496 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 LSSP48449 732 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 RPS15AP62244 130 aaKnown RBP29.11■■■□□ 2.25
CCM2-219ENST00000544363 ZIC1Q15915 447 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 FCRL6Q6DN72 434 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 KANSL1Q7Z3B3 1105 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 KRTCAP2Q8N6L1 136 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 TRPV3Q8NET8 790 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 MCUR1Q96AQ8 359 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 F2RL3Q96RI0 385 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 CLMPQ9H6B4 373 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 EVA1BQ9NVM1 165 aa29.11■■■□□ 2.25
CCM2-219ENST00000544363 TTC28Q96AY4 2481 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 RHPN2P1A8MT19 583 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 MRASO14807 208 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 PCDH7O60245 1069 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 PROS1P07225 676 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 ANXA4P09525 319 aaPredicted RBP29.1■■■□□ 2.25
CCM2-219ENST00000544363 COQ5Q5HYK3 327 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 C16orf89Q6UX73 402 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 ZNF438Q7Z4V0 828 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 EGLN2Q96KS0 407 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 TMEM74Q96NL1 305 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 NDE1Q9NXR1 346 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 RNF215Q9Y6U7 377 aa29.1■■■□□ 2.25
CCM2-219ENST00000544363 YKT6O15498 198 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 SERPIND1P05546 499 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 CAPZBP47756 277 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 CLNS1AP54105 237 aaKnown RBP29.09■■■□□ 2.25
CCM2-219ENST00000544363 PPP1CAP62136 330 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 FBXO42Q6P3S6 717 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 RETREG3Q86VR2 466 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 SLC35F3Q8IY50 421 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 DEFB107AQ8IZN7 70 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 PCYOX1LQ8NBM8 494 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 WDR48Q8TAF3 677 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 NUDT8Q8WV74 236 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 VPS33AQ96AX1 596 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 PPM1MQ96MI6 270 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 NLGN3Q9NZ94 848 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 LRIT1Q9P2V4 623 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 SLC6A14Q9UN76 642 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 PGM1P36871 562 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 EPHA4P54764 986 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 RELAQ04206 551 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 CYP4F3Q08477 520 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 BAHD1Q8TBE0 780 aaPredicted RBP29.09■■■□□ 2.25
CCM2-219ENST00000544363 SAP25Q8TEE9 199 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 CENPKQ9BS16 269 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 ABCG4Q9H172 646 aa29.09■■■□□ 2.25
CCM2-219ENST00000544363 GNG14A0A1W2PPG7 69 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 PATE3B3GLJ2 98 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 PLPP1O14494 284 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 NDUFS4O43181 175 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 NUDT21O43809 227 aaKnown RBP29.08■■■□□ 2.25
CCM2-219ENST00000544363 PRMT3O60678 531 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 EEDO75530 441 aaKnown RBP29.08■■■□□ 2.25
CCM2-219ENST00000544363 ASMTP46597 345 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 TLR1Q15399 786 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 TIGD2Q4W5G0 525 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms