RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 DLSTP36957 453 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 PIK3CGP48736 1102 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 EMP3P54852 163 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 HERVK_113P63132 956 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 CYP4F2P78329 520 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 SLC9A5Q14940 896 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 TBCCQ15814 346 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 FAM214AQ32MH5 1076 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 TNFAIP8L3Q5GJ75 292 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 ADNP2Q6IQ32 1131 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 TMIGD1Q6UXZ0 262 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 ZYG11AQ6WRX3 759 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 KRT78Q8N1N4 520 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 KCT2Q8NC54 265 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 CAMKVQ8NCB2 501 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 EFCAB11Q9BUY7 163 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 C1QTNF3Q9BXJ4 246 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 ERVK-6Q9BXR3 956 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 NT5DC2Q9H857 520 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 IPPKQ9H8X2 491 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 GPN2Q9H9Y4 310 aaPredicted RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 SLC22A11Q9NSA0 550 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 SLC17A7Q9P2U7 560 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 IL17BQ9UHF5 180 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 ZNF490Q9ULM2 529 aaPredicted RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 PLLPQ9Y342 182 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 MRPS18BQ9Y676 258 aaKnown RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 CFAP47Q6ZTR5 3102 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 FOXS1O43638 330 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 KATNA1O75449 491 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 SERPIND1P05546 499 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 SLC35G6P0C7Q6 338 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 MYL2P10916 166 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 CXCR2P25025 360 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 PRKAA2P54646 552 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 DCDP81605 110 aaKnown RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 HYAL2Q12891 473 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 DNASE1L3Q13609 305 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 NKAIN1Q4KMZ8 207 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 UNC50Q53HI1 259 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 ZNF678Q5SXM1 525 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 GARNL3Q5VVW2 1013 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 BROXQ5VW32 411 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 TMEM214Q6NUQ4 689 aaKnown RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 COX15Q7KZN9 410 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 PRSS41Q7RTY9 318 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 VN1R5Q7Z5H4 357 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 EXOC3L1Q86VI1 746 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 SLC22A9Q8IVM8 553 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 CCDC63Q8NA47 563 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 OR52B6Q8NGF0 335 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 ZCCHC10Q8TBK6 192 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 RDH11Q8TC12 318 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 NT5CQ8TCD5 201 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 CREB3L4Q8TEY5 395 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 KIAA1143Q96AT1 154 aaPredicted RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 PGM2Q96G03 612 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 SMC6Q96SB8 1091 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 DPH2Q9BQC3 489 aaPredicted RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 PITHD1Q9GZP4 211 aaPredicted RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 AICDAQ9GZX7 198 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 NOL11Q9H8H0 719 aaKnown RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 CPNE5Q9HCH3 593 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 SEMA4BQ9NPR2 832 aaPredicted RBP14.36□□□□□ -0.11
CD9-210ENST00000543916 SENP1Q9P0U3 644 aa14.36□□□□□ -0.11
CD9-210ENST00000543916 ITPR1Q14643 2758 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 A0A0A6YYC8 382 aaPredicted RBP14.35□□□□□ -0.11
CD9-210ENST00000543916 A0A1B0GTL3 188 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 C21orf140B9A014 251 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 C4orf51C9J302 202 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 I3L1I5 382 aaPredicted RBP14.35□□□□□ -0.11
CD9-210ENST00000543916 PPP6CO00743 305 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 TYROBPO43914 113 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 CPA3P15088 417 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 TSPAN8P19075 237 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 IMPDH1P20839 514 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 AGXTP21549 392 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 OR1D4P47884 311 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 CDH13P55290 713 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 RPS18P62269 152 aaKnown RBP14.35□□□□□ -0.11
CD9-210ENST00000543916 TRAF3Q13114 568 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 LAPTM5Q13571 262 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 PWP1Q13610 501 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 PAGE2BQ5JRK9 111 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 CROCCP2Q86T23 111 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 LAS2Q8IYD9 372 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 L3MBTL4Q8NA19 623 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 TRPV3Q8NET8 790 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 TCP10LQ8TDR4 215 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 L3HYPDHQ96EM0 354 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 CRELD1Q96HD1 420 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 FAM111AQ96PZ2 611 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 CDK15Q96Q40 435 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 SLC6A16Q9GZN6 736 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms