RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ERICH5Q6P6B1 374 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 FKBP9P1Q75LS8 142 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 RAB42Q8N4Z0 105 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 ZNF740Q8NDX6 193 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 COQ8BQ96D53 544 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 GABRG3Q99928 467 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 PCBD2Q9H0N5 130 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 REEP4Q9H6H4 257 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 FBRSQ9HAH7 460 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 PCDHB11Q9Y5F2 797 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 SZT2Q5T011 3432 aa16.4■□□□□ 0.22
PTPRO-209ENST00000543886 PLOD2O00469 737 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 GNGT2O14610 69 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 YY2O15391 372 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 RNGTTO60942 597 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 CCNDBP1O95273 360 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 H6PDO95479 791 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 ATP6V1B1P15313 513 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 GPX2P18283 190 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 MYF6P23409 242 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 PTX3P26022 381 aaPredicted RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 RPL3P39023 403 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 RPL5P46777 297 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 DMPKQ09013 629 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SLC36A3Q495N2 470 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 TMEM196Q5HYL7 178 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 R3HCC1LQ7Z5L2 792 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 DHRSXQ8N5I4 330 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 WDR48Q8TAF3 677 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SMPDL3AQ92484 453 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 RMND5BQ96G75 393 aaPredicted RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SLC17A9Q9BYT1 436 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 PELI2Q9HAT8 420 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 AASDHPPTQ9NRN7 309 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 ATAD3AQ9NVI7 634 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 ATP6V1HQ9UI12 483 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 PADI4Q9UM07 663 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 VPS4AQ9UN37 437 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 CORO2BQ9UQ03 480 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 MYRFQ9Y2G1 1151 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 UPK1AO00322 258 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 GBAP04062 536 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 IL1RNP18510 177 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 PPIBP23284 216 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SH3BGRP55822 239 aaPredicted RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 NUMA1Q14980 2115 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 DUS1LQ6P1R4 473 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 ZNF551Q7Z340 670 aaPredicted RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 FAM129CQ86XR2 697 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 ZDHHC13Q8IUH4 622 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 EID3Q8N140 333 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 OR4A15Q8NGL6 344 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 PNPT1Q8TCS8 783 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 FERD3LQ96RJ6 166 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 AIF1LQ9BQI0 150 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SLC6A17Q9H1V8 727 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 TPT1P8Q9HAU6 139 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 CLDND1Q9NY35 253 aa16.39■□□□□ 0.21
PTPRO-209ENST00000543886 SAMD4AQ9UPU9 718 aaKnown RBP16.39■□□□□ 0.21
PTPRO-209ENST00000543886 RNASET2O00584 256 aaKnown RBP16.38■□□□□ 0.21
PTPRO-209ENST00000543886 KLK1P06870 262 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 GNAO1P09471 354 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 PABPC4LP0CB38 370 aaKnown RBP16.38■□□□□ 0.21
PTPRO-209ENST00000543886 HOXB2P14652 356 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CXCR2P25025 360 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CTHP32929 405 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CAPGP40121 348 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 ADPRHP54922 357 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 VAC14Q08AM6 782 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 HTR4Q13639 388 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 VMACQ2NL98 169 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TMEM259Q4ZIN3 620 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 LRRC23Q53EV4 343 aaPredicted RBP16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CPZQ66K79 652 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBPL2Q6SJ96 375 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 SATL1Q86VE3 508 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 ZZZ3Q8IYH5 903 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CLEC4FQ8N1N0 589 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 C16orf78Q8WTQ4 265 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 PYURFQ96I23 114 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 C12orf66Q96MD2 445 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TIMM29Q9BSF4 260 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 CAAP1Q9H8G2 361 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 RMI1Q9H9A7 625 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 VCX3AQ9NNX9 186 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 MYNNQ9NPC7 610 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 MOSPD1Q9UJG1 213 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 MYO9BQ13459 2157 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3DA0A087WVF3 549 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3IA0A087WXS9 549 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3EA0A087X179 549 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3KA0A087X1G2 549 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3FA6NER0 549 aaPredicted RBP16.38■□□□□ 0.21
PTPRO-209ENST00000543886 ANKDD1BA6NHY2 528 aa16.38■□□□□ 0.21
PTPRO-209ENST00000543886 TBC1D3LB9A6J9 549 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms