RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ZNF740Q8NDX6 193 aa17.5■□□□□ 0.39
COPS7A-216ENST00000543170 TRPV3Q8NET8 790 aa17.5■□□□□ 0.39
COPS7A-216ENST00000543170 NT5CQ8TCD5 201 aa17.5■□□□□ 0.39
COPS7A-216ENST00000543170 ROPN1BQ9BZX4 212 aaPredicted RBP17.5■□□□□ 0.39
COPS7A-216ENST00000543170 WDR54Q9H977 334 aa17.5■□□□□ 0.39
COPS7A-216ENST00000543170 ROPN1Q9HAT0 212 aaPredicted RBP17.5■□□□□ 0.39
COPS7A-216ENST00000543170 CPSF2Q9P2I0 782 aaKnown RBP17.5■□□□□ 0.39
COPS7A-216ENST00000543170 NXT1Q9UKK6 140 aaKnown RBP17.5■□□□□ 0.39
COPS7A-216ENST00000543170 MGAQ8IWI9 3026 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 NDUFS4O43181 175 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 SMIM24O75264 130 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 GLRA3O75311 464 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 NSA2O95478 260 aaKnown RBP17.49■□□□□ 0.39
COPS7A-216ENST00000543170 PYGBP11216 843 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 EPB42P16452 691 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 KRT15P19012 456 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 VARSP26640 1264 aaKnown RBP17.49■□□□□ 0.39
COPS7A-216ENST00000543170 NFKB2Q00653 900 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 RGS1Q08116 209 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 LAPTM5Q13571 262 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 DSG2Q14126 1118 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 UGT8Q16880 541 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 PAGE2BQ5JRK9 111 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 SH2D5Q6ZV89 423 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 OVCH1Q7RTY7 1134 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 TMEM151AQ8N4L1 468 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 PTGR2Q8N8N7 351 aaPredicted RBP17.49■□□□□ 0.39
COPS7A-216ENST00000543170 ANKRD53Q8N9V6 530 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 ZNF304Q9HCX3 659 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 LGALS13Q9UHV8 139 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 SLC22A7Q9Y694 548 aa17.49■□□□□ 0.39
COPS7A-216ENST00000543170 CACNA1GO43497 2377 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 IGLV3-12A0A075B6K2 115 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 SMIM23A6NLE4 172 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 H0YIG0 161 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 E2F3O00716 465 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 NKX2-8O15522 239 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 FOXS1O43638 330 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 UGDHO60701 494 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 PRAMEF4O60810 478 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 KLF7O75840 302 aaPredicted RBP17.48■□□□□ 0.39
COPS7A-216ENST00000543170 WFS1O76024 890 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 SBK3P0C264 359 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 RPS18P62269 152 aaKnown RBP17.48■□□□□ 0.39
COPS7A-216ENST00000543170 IRF8Q02556 426 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 DOC2AQ14183 400 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 XKR6Q5GH73 641 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 PRAMEF9Q5VWM5 478 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 MLIPQ5VWP3 458 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 NIPAL1Q6NVV3 410 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 TMIGD1Q6UXZ0 262 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.48■□□□□ 0.39
COPS7A-216ENST00000543170 CYP4X1Q8N118 509 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 OR2Y1Q8NGV0 311 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 OR2W6PQ8NHA6 318 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 ADAMTS17Q8TE56 1095 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 TMEM109Q9BVC6 243 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 SLC6A16Q9GZN6 736 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 TMEM216Q9P0N5 145 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 FAM208BQ5VWN6 2430 aa17.48■□□□□ 0.39
COPS7A-216ENST00000543170 A0A1W2PPM1 405 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 URADA6NGE7 173 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 GOLGA8RI6L899 631 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 ERVH48-1M5A8F1 160 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 CNOT3O75175 753 aaKnown RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 SERPINA6P08185 405 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 CD22P20273 847 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 TAC1P20366 129 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 FBLP22087 321 aaKnown RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 FOLR3P41439 243 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 OR1D4P47884 311 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 AVPR1BP47901 424 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 CHIT1Q13231 466 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 IL10RAQ13651 578 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 SLC9A5Q14940 896 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 HERC3Q15034 1050 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 RBBP5Q15291 538 aaKnown RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 AFAP1L2Q8N4X5 818 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 DTWD1Q8N5C7 304 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 METTL27Q8N6F8 245 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 TEX9Q8N6V9 391 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 KCT2Q8NC54 265 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 CREB3L4Q8TEY5 395 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 THAP4Q8WY91 577 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 TTC9Q92623 222 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 UBE2E3Q969T4 207 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 NACC2Q96BF6 587 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 MKS1Q9NXB0 559 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 ZNF282Q9UDV7 671 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 MRPS2Q9Y399 296 aaKnown RBP17.47■□□□□ 0.39
COPS7A-216ENST00000543170 MAP4K5Q9Y4K4 846 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 ANGPTL3Q9Y5C1 460 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 MAU2Q9Y6X3 613 aa17.47■□□□□ 0.39
COPS7A-216ENST00000543170 VSTM2BA6NLU5 285 aa17.46■□□□□ 0.39
COPS7A-216ENST00000543170 A8MT66 165 aa17.46■□□□□ 0.39
COPS7A-216ENST00000543170 SIX3O95343 332 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms