RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 C21orf58P58505 322 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 GAB1Q13480 694 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ADRM1Q16186 407 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 VTCN1Q7Z7D3 282 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 LRRTM4Q86VH4 590 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 LAS2Q8IYD9 372 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ZCCHC7Q8N3Z6 543 aaKnown RBP15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ZNF513Q8N8E2 541 aaPredicted RBP15.69■□□□□ 0.1
COL4A1-204ENST00000543140 WDR34Q96EX3 536 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 SORBS1Q9BX66 1292 aaKnown RBP15.69■□□□□ 0.1
COL4A1-204ENST00000543140 DZANK1Q9NVP4 752 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 LATO43561 262 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 APODP05090 189 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 KLK1P06870 262 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 TIE1P35590 1138 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 CCR3P51677 355 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 LAPTM4AQ15012 233 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 KCTD21Q4G0X4 260 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 DUS1LQ6P1R4 473 aaKnown RBP15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ANGPTL8Q6UXH0 198 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 UNC5DQ6UXZ4 953 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 USP51Q70EK9 711 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 CHST15Q7LFX5 561 aaPredicted RBP15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ZDHHC21Q8IVQ6 265 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 ADHFE1Q8IWW8 467 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 VPS37AQ8NEZ2 397 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 STARD8Q92502 1023 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 MAL2Q969L2 176 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 MAGIXQ9H6Y5 334 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 FZD4Q9ULV1 537 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 COMMD3-BMI1R4GMX3 469 aa15.69■□□□□ 0.1
COL4A1-204ENST00000543140 FOXE1O00358 373 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 PI15O43692 258 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 DIRAS1O95057 198 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 ELK4P28324 431 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 AQP1P29972 269 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 DCTP40126 519 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 ZNF763Q0D2J5 394 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 CAMK2GQ13555 558 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 C2orf27AQ580R0 203 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 OR4A15Q8NGL6 344 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 CIDECQ96AQ7 238 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 OSBPL10Q9BXB5 764 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 VNN3Q9NY84 501 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 TAC3Q9UHF0 121 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 VPS4AQ9UN37 437 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 ABCG2Q9UNQ0 655 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 DMTF1Q9Y222 760 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 hCG_2039718K7EN88 272 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 B4GAT1O43505 415 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 KELP23276 732 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 SHMT2P34897 504 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 FAM180BQ6P0A1 224 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 GALNT18Q6P9A2 607 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 TMIGD1Q6UXZ0 262 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 DCUN1D3Q8IWE4 304 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 GANCQ8TET4 914 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 COQ8BQ96D53 544 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 RSPH9Q9H1X1 276 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 EHD1Q9H4M9 534 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 SPASTQ9UBP0 616 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 SAMD4AQ9UPU9 718 aaKnown RBP15.68■□□□□ 0.1
COL4A1-204ENST00000543140 CEPT1Q9Y6K0 416 aa15.68■□□□□ 0.1
COL4A1-204ENST00000543140 A0A087WXM4 84 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 H0YAE9 185 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 HS6ST1O60243 411 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 PSMB5P28074 263 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 KDELR2P33947 212 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 ALDH3B2P48448 385 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 CLCNKAP51800 687 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 HNRNPFP52597 415 aaKnown RBP15.67■□□□□ 0.1
COL4A1-204ENST00000543140 TAS2R50P59544 299 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 CYP4F2P78329 520 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 PPP2R2BQ00005 443 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 C2orf80Q0P641 193 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 FGL2Q14314 439 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 METRNLQ641Q3 311 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 EID3Q8N140 333 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 SLC6A17Q9H1V8 727 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 OSGEPL1Q9H4B0 414 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 REEP4Q9H6H4 257 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 BTNL2Q9UIR0 455 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 C1orf226A1L170 272 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 KLHL18O94889 574 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 FKBP9O95302 570 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 FUCA1P04066 466 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 PIGAP37287 484 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 TUBA4AP68366 448 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 HBA1P69905 142 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 IRF4Q15306 451 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 ITPRIPL2Q3MIP1 535 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 ANXA8L1Q5VT79 327 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 CPZQ66K79 652 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 KIAA1211LQ6NV74 962 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 ZNF852Q6ZMS4 543 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 FKBP9P1Q75LS8 142 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 GPR155Q7Z3F1 870 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 VN1R5Q7Z5H4 357 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 MMP21Q8N119 569 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms