RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ILF2Q12905 390 aaKnown RBP14.78□□□□□ -0.04
VPS33A-206ENST00000542310 HERC3Q15034 1050 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 FAAH2Q6GMR7 532 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 PRSS41Q7RTY9 318 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 MAMDC2Q7Z304 686 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-206ENST00000542310 TBC1D19Q8N5T2 526 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 GPATCH11Q8N954 259 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 OR4K1Q8NGD4 311 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 OR51Q1Q8NH59 317 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 CFAP36Q96G28 342 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 OR1F2PQ96R84 312 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 WDR83Q9BRX9 315 aaKnown RBP14.78□□□□□ -0.04
VPS33A-206ENST00000542310 PPANQ9NQ55 473 aaKnown RBP14.78□□□□□ -0.04
VPS33A-206ENST00000542310 ARL15Q9NXU5 204 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 SLC17A6Q9P2U8 582 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 VWA7Q9Y334 891 aa14.78□□□□□ -0.04
VPS33A-206ENST00000542310 TRBC2A0A5B9 178 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 UQCRHP07919 91 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 ITGAMP11215 1152 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 NPPBP16860 134 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 ZNF37AP17032 561 aaPredicted RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 XCR1P46094 333 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SNRPNP63162 240 aaKnown RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 CBLBQ13191 982 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 PWP1Q13610 501 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 MINDY4Q4G0A6 757 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 C4orf17Q53FE4 359 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 PLAG1Q6DJT9 500 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 TRMT10BQ6PF06 316 aaKnown RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 CPEB2Q7Z5Q1 589 aaKnown RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SLC26A11Q86WA9 606 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 CREG2Q8IUH2 290 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SIRT6Q8N6T7 355 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 ZCCHC10Q8TBK6 192 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SLC13A3Q8WWT9 602 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 SNF8Q96H20 258 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 OLFM1Q99784 485 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 OLAHQ9NV23 265 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 ZFATQ9P243 1243 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 TEKT2Q9UIF3 430 aa14.77□□□□□ -0.05
VPS33A-206ENST00000542310 DIDO1Q9BTC0 2240 aaKnown RBP14.77□□□□□ -0.05
VPS33A-206ENST00000542310 FEZF1A0PJY2 475 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 E7ESA3 106 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 STATHP02808 62 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 CELA2AP08217 269 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 MYBL2P10244 700 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 ITGA8P53708 1063 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 PER3P56645 1201 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 CDKL1Q00532 357 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 EXT1Q16394 746 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 PPP1R3AQ16821 1122 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 MFSD4BQ5TF39 518 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 ABHD17BQ5VST6 288 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 ZNF324BQ6AW86 544 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-206ENST00000542310 SBSNQ6UWP8 590 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 KLHL7Q8IXQ5 586 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 KCT2Q8NC54 265 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 CATSPER1Q8NEC5 780 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 OR1N1Q8NGS0 311 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 ALKBH8Q96BT7 664 aaKnown RBP14.76□□□□□ -0.05
VPS33A-206ENST00000542310 CAPZA3Q96KX2 299 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 OR4K3Q96R72 315 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 CYTH2Q99418 400 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 NAPGQ99747 312 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-206ENST00000542310 NSMCE4AQ9NXX6 385 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 HCN3Q9P1Z3 774 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 RNF14Q9UBS8 474 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 SAR1BQ9Y6B6 198 aa14.76□□□□□ -0.05
VPS33A-206ENST00000542310 OR5H15A6NDH6 313 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 SGK494L7N484 410 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 NDUFS4O43181 175 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 LCMT2O60294 686 aaKnown RBP14.75□□□□□ -0.05
VPS33A-206ENST00000542310 RDH16O75452 317 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 JRKO75564 520 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 AHRP35869 848 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 TDGF1P3P51864 188 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 REEP5Q00765 189 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 RGS1Q08116 209 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 MGAT5Q09328 741 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 ZXDCQ2QGD7 858 aaPredicted RBP14.75□□□□□ -0.05
VPS33A-206ENST00000542310 LANCL3Q6ZV70 420 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 ANKRD37Q7Z713 158 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 ZC3HC1Q86WB0 502 aaKnown RBP14.75□□□□□ -0.05
VPS33A-206ENST00000542310 PDSS2Q86YH6 399 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 NKAPQ8N5F7 415 aaKnown RBP14.75□□□□□ -0.05
VPS33A-206ENST00000542310 NT5CQ8TCD5 201 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 SLC5A11Q8WWX8 675 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 NR4A3Q92570 626 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 PYCR2Q96C36 320 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 TRIM51Q9BSJ1 452 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 PELI2Q9HAT8 420 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 CLK4Q9HAZ1 481 aaKnown RBP14.75□□□□□ -0.05
VPS33A-206ENST00000542310 POPDC3Q9HBV1 291 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 ZFP69BQ9UJL9 534 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 NAALAD2Q9Y3Q0 740 aa14.75□□□□□ -0.05
VPS33A-206ENST00000542310 A1L4Q6 167 aa14.74□□□□□ -0.05
VPS33A-206ENST00000542310 USP27XA6NNY8 438 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms