RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 POU2F3Q9UKI9 436 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 BMP6P22004 513 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 DHCR24Q15392 516 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 SH3PXD2AQ5TCZ1 1133 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 DUS1LQ6P1R4 473 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 LRRC52Q8N7C0 313 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 OR13C3Q8NGS6 347 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 C9JVG2 144 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 VILLO15195 856 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PIP5K1CO60331 668 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PRPS1L1P21108 318 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 S1PR1P21453 382 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 ESX1Q8N693 406 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 FBXO22Q8NEZ5 403 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 MTERF1Q99551 399 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 RTFDC1Q9BY42 306 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 GTF2IRD1Q9UHL9 959 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 A0A0A6YYH2 397 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 A6NJ64 397 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 SLC31A1O15431 190 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 MSI1O43347 362 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 SLITRK5O94991 958 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 KLK3P07288 261 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 SLC6A6P31641 620 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 RPP30P78346 268 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 FTMTQ8N4E7 242 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 FANK1Q8TC84 345 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PTGES2Q9H7Z7 377 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PLK2Q9NYY3 685 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 RBBP9O75884 186 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 LCKP06239 509 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 SLC51AQ86UW1 340 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 LRRC58Q96CX6 371 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 DDX4Q9NQI0 724 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 OR2S2Q9NQN1 319 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 MGAT4CQ9UBM8 478 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PROM1O43490 865 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 CNOT4O95628 575 aaKnown RBP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 BCHEP06276 602 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 FASLGP48023 281 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 FMO1Q01740 532 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 UBQLNLQ8IYU4 475 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 EXOSC1Q9Y3B2 195 aaKnown RBP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 NPIPA2E9PIF3 369 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 NPIPA3F8WFD2 350 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 RHOQP17081 205 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TBRG1Q3YBR2 411 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TMEM209Q96SK2 561 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 BTBD1Q9H0C5 482 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 BIN3Q9NQY0 253 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 HES2Q9Y543 173 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 GLUD2P49448 558 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 RBM39Q14498 530 aaKnown RBP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 GSG1LQ6UXU4 331 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 GNPDA2Q8TDQ7 276 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PWWP2AQ96N64 755 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 LHX5Q9H2C1 402 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 HECW2Q9P2P5 1572 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 AHSA1O95433 338 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 SYT16Q17RD7 645 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 FBXO48Q5FWF7 155 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 DPY19L3Q6ZPD9 716 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 SPPL2BQ8TCT7 592 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 BEX2Q9BXY8 128 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.93□□□□□ -0.021e-13■■□□□ 11.9
HMGA2-210ENST00000541363 BEX1Q9HBH7 125 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 Q9N2J8 555 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.93□□□□□ -0.02
HMGA2-210ENST00000541363 ENGP17813 658 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 ACTR1BP42025 376 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 CASP6P55212 293 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 SP3Q02447 781 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TAF10Q12962 218 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TRAPPC6BQ86SZ2 158 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 LILRB2Q8N423 598 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF283Q8N7M2 679 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 CYP2W1Q8TAV3 490 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TM9SF4Q92544 642 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 NSMAFQ92636 917 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 K7EPI3 171 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 CDC7O00311 574 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 WDPCPO95876 746 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 LPLP06858 475 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PRKAR1BP31321 381 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TAS2R40P59535 323 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PHOSPHO1Q8TCT1 267 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 NUS1Q96E22 293 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 SLC41A3Q96GZ6 507 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 PKP4Q99569 1192 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 ACTR6Q9GZN1 396 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 TIGARQ9NQ88 270 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 HIF1ANQ9NWT6 349 aa14.93□□□□□ -0.02
HMGA2-210ENST00000541363 UTS2RQ9UKP6 389 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms