RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PHEXP78562 749 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 MC1RQ01726 317 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 GPS2Q13227 327 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 DOC2AQ14183 400 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 SLBPQ14493 270 aaKnown RBP eCLIP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 HERC3Q15034 1050 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 RBBP5Q15291 538 aaKnown RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 CRTC2Q53ET0 693 aaPredicted RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 GRHL2Q6ISB3 625 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 MED27Q6P2C8 311 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 TTLL10Q6ZVT0 673 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 GOLGA7Q7Z5G4 137 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 SPACA3Q8IXA5 215 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 CCDC63Q8NA47 563 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 MR1Q95460 341 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 ATP6V1E2Q96A05 226 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 FKBP10Q96AY3 582 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 GBP5Q96PP8 586 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 DRC3Q9H069 523 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 RHBGQ9H310 441 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 CENPHQ9H3R5 247 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 GPN2Q9H9Y4 310 aaPredicted RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 ZMIZ1Q9ULJ6 1067 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 RUVBL1Q9Y265 456 aaKnown RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 PADI2Q9Y2J8 665 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 ACACAQ13085 2346 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 TAF4O00268 1085 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 LCMT2O60294 686 aaKnown RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 NRP2O60462 931 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 CLEC3AO75596 197 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 SIX3O95343 332 aaPredicted RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 CLDN9O95484 217 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ALBP02768 609 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 EPORP19235 508 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 TCN2P20062 427 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ALAS2P22557 587 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 AVPR1BP47901 424 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 CCNG1P51959 295 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 NKAIN1Q4KMZ8 207 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 FBXO48Q5FWF7 155 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF678Q5SXM1 525 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 C16orf46Q6P387 395 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ABHD13Q7L211 337 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 VN1R4Q7Z5H5 301 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 PLD3Q8IV08 490 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 LAS2Q8IYD9 372 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 L3MBTL4Q8NA19 623 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 SRFBP1Q8NEF9 429 aaKnown RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF483Q8TF39 744 aaPredicted RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 DCBLD2Q96PD2 775 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 GPN3Q9UHW5 284 aaPredicted RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 NXT1Q9UKK6 140 aaKnown RBP17.89■□□□□ 0.45
VPS33A-205ENST00000541169 EMCNQ9ULC0 261 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ASB1Q9Y576 335 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 CHD8Q9HCK8 2581 aa17.89■□□□□ 0.45
VPS33A-205ENST00000541169 ACACBO00763 2458 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 A0A088AWK7 358 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 G3V2L1 256 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 H0YIG0 161 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 H0YIV9 168 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 TM9SF1O15321 606 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 NDUFS4O43181 175 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 SUPT7LO94864 414 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF10P21506 573 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 VARSP26640 1264 aaKnown RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 PIK3CBP42338 1070 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 TMPRSS3P57727 454 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 MEF2AQ02078 507 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 TLE3Q04726 772 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 TGM3Q08188 693 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 GGTA1PQ4G0N0 100 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF385CQ66K41 422 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 TMEM214Q6NUQ4 689 aaKnown RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 NOL11Q9H8H0 719 aaKnown RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 WDR54Q9H977 334 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF304Q9HCX3 659 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 OXSMQ9NWU1 459 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 PSD3Q9NYI0 1048 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 DHCR7Q9UBM7 475 aaKnown RBP17.88■□□□□ 0.45
VPS33A-205ENST00000541169 NDOR1Q9UHB4 597 aa17.88■□□□□ 0.45
VPS33A-205ENST00000541169 AHCTF1Q8WYP5 2266 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 APC2O95996 2303 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 FOXO6A8MYZ6 492 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 TYROBPO43914 113 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 IL10P22301 178 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 DLSTP36957 453 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ARFIP1P53367 373 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 PKNOX1P55347 436 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 CLCQ05315 142 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF33BQ06732 778 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 HKDC1Q2TB90 917 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 PRAMEF17Q5VTA0 474 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 LIPMQ5VYY2 423 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 CCDC81Q6ZN84 652 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ARHGEF39Q8N4T4 335 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ANKRD53Q8N9V6 530 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 ZNF740Q8NDX6 193 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 TCP10LQ8TDR4 215 aa17.87■□□□□ 0.45
VPS33A-205ENST00000541169 NACC2Q96BF6 587 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms