RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 DEFB113Q30KQ7 82 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM214AQ32MH5 1076 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 TFDP3Q5H9I0 405 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 TCTE1Q5JU00 501 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 NCBP2-AS2Q69YL0 99 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 PRMT9Q6P2P2 845 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM151BQ6UXP7 276 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 C3P1Q6ZMU1 363 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 DET1Q7L5Y6 550 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 DAAM2Q86T65 1068 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 NT5DC3Q86UY8 548 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IGDCC3Q8IVU1 814 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 LRRC56Q8IYG6 542 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 LILRA3Q8N6C8 439 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CNTD1Q8N815 330 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MLKLQ8NB16 471 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM98AQ8NCA5 519 aaKnown RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MDS2Q8NDY4 140 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FLVCR1-AS1Q8TAF5 88 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM71BQ8TC56 605 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MZB1Q8WU39 189 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 RND1Q92730 232 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 HDAC10Q969S8 669 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FBXW5Q969U6 566 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 TSPAN17Q96FV3 270 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IMP4Q96G21 291 aaKnown RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 SCMH1Q96GD3 660 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF285Q96NJ3 590 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 NRTNQ99748 197 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 HGH1Q9BTY7 390 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CD244Q9BZW8 370 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 UCK2Q9BZX2 261 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 TRIM7Q9C029 511 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 SLC25A51Q9H1U9 297 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 OR52A5Q9H2C5 316 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 XKR8Q9H6D3 395 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 RASSF1Q9NS23 344 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CUTCQ9NTM9 273 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CATSPERZQ9NTU4 200 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 TAS2R14Q9NYV8 317 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 OR6C2Q9NZP2 312 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MYOTQ9UBF9 498 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF282Q9UDV7 671 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ICKQ9UPZ9 632 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 RNF6Q9Y252 685 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 L3MBTL1Q9Y468 752 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ASB1Q9Y576 335 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 SCINQ9Y6U3 715 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CUBNO60494 3623 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PCM1Q15154 2024 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 LOC102723996A0A087X1L8 192 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TCRBV5S2A0A599 114 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 DDX3XO00571 662 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 GAPDHSO14556 408 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 RASGRF2O14827 1237 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 EPHB6O15197 1021 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 GPR39O43194 453 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 SGTAO43765 313 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 RAF1P04049 648 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 AMY2AP04746 511 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM253P0C7T8 217 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC172P0C7W6 258 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ITGAMP11215 1152 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 RALBP11234 206 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TCF4P15884 667 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 AMY2BP19961 511 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PCSK6P29122 969 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 EEF1DP29692 281 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PTGS2P35354 604 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PEX19P40855 299 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 OR1D4P47884 311 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 LIMS1P48059 325 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PRLHRP49683 370 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 KLK7P49862 253 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ARSEP51690 589 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PPP2R2BQ00005 443 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 HSF1Q00613 529 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZBTB17Q13105 803 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PRKG2Q13237 762 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TUBA3CQ13748 450 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 KIR2DS3Q14952 304 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF658BQ4V348 819 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TCP11X2Q5H9J9 407 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 SHEQ5VZ18 495 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF449Q6P9G9 518 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TUBA3EQ6PEY2 450 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 KDELC1Q6UW63 502 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 ARSKQ6UWY0 536 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PAMR1Q6UXH9 720 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 NEK10Q6ZWH5 1172 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 CDC20BQ86Y33 519 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 PRSS58Q8IYP2 241 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 MARVELD2Q8N4S9 558 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 CPSF7Q8N684 471 aaKnown RBP4.35□□□□□ -1.71
SNHG1-214ENST00000540865 HORMAD2Q8N7B1 307 aa4.35□□□□□ -1.71
SNHG1-214ENST00000540865 TTC29Q8NA56 475 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms