RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SPATA19	Q7Z5L4	167 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C10orf111	Q8N326	155 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PIK3C3	Q8NEB9	887 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PIGK	Q92643	395 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLIP3	Q96DZ5	547 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KLHDC7B	Q96G42	594 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF514	Q96K75	400 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UGT2B28	Q9BY64	529 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ABCG8	Q9H221	673 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KCNH6	Q9H252	994 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MUC13	Q9H3R2	512 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FBXO8	Q9NRD0	319 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C14orf119	Q9NWQ9	140 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	QPCTL	Q9NXS2	382 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C3orf18	Q9UK00	162 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCDC163	A0A0D9SF12	145 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FFAR3	O14843	346 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR42	O15529	346 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IDH3B	O43837	385 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RNGTT	O60942	597 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRIM16	O95361	564 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SERPINA1	P01009	418 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KRT8	P05787	483 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR56A5	P0C7T3	313 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LINC00271	P0C7V0	271 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MYCLP1	P12525	358 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FDXR	P22570	491 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD70	P32970	193 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	STARD6	P59095	220 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ERVK-8	P63133	956 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC14A2	Q15849	920 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TMEM196	Q5HYL7	178 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF691	Q5VV52	312 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP20A1	Q6UW02	462 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BHLHA9	Q7RTU4	235 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZFAND4	Q86XD8	727 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NLGN4X	Q8N0W4	816 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MINDY2	Q8NBR6	621 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	STAG3L4	Q8TBR4	150 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	METTL6	Q8TCB7	284 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NETO1	Q8TDF5	533 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	YIPF6	Q96EC8	236 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR21	Q99679	349 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM83D	Q9H4H8	585 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ACTL8	Q9H568	366 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYNDIG1	Q9H7V2	258 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZFYVE1	Q9HBF4	777 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC6A13	Q9NSD5	602 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OSER1	Q9NX31	292 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD274	Q9NZQ7	290 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OPTC	Q9UBM4	332 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FZD4	Q9ULV1	537 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EIF3L	Q9Y262	564 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HS3ST2	Q9Y278	367 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPSM3	Q9Y4H4	160 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ACTL7A	Q9Y615	435 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CXCR6	O00574	342 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	WNT9A	O14904	365 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DYRK3	O43781	588 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	WISP3	O95389	354 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF682	O95780	498 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IGLV3-25	P01717	112 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C1QC	P02747	245 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KLKB1	P03952	638 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CAPN1	P07384	714 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BMP1	P13497	986 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HLA-E	P13747	358 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IGFBP5	P24593	272 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ACVRL1	P37023	503 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LIPA	P38571	399 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MAPK9	P45984	424 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC6A11	P48066	632 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ERVPABLB-1	P60509	514 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP4F2	P78329	520 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NFKB2	Q00653	900 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MVK	Q03426	396 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP4F3	Q08477	520 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MADCAM1	Q13477	382 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TP53BP2	Q13625	1128 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GBX1	Q14549	363 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AP5B1	Q2VPB7	878 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	COQ5	Q5HYK3	327 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CERS6	Q6ZMG9	384 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		Q6ZPB1	254 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPRIN3	Q6ZVF9	776 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GDPD3	Q7L5L3	318 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANKRD46	Q86W74	232 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GALNT13	Q8IUC8	556 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EID3	Q8N140	333 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	METTL4	Q8N3J2	472 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KRTCAP2	Q8N6L1	136 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PJA1	Q8NG27	643 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LILRB4	Q8NHJ6	448 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BTN2A2	Q8WVV5	523 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PROX1	Q92786	737 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SH3KBP1	Q96B97	665 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RHBDF1	Q96CC6	855 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EXOC2	Q96KP1	924 aa		5.48	□□□□□ -1.53

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