RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 ELOA3BQ3SY89 546 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ELOA3Q8NG57 546 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ZDHHC1Q8WTX9 485 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 KCNN1Q92952 543 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PAPOLGQ9BWT3 736 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 IQSEC2Q5JU85 1478 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 LOC102723532A0A0G2JNH3 316 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 EEF1E1-BLOC1S5C9J1V9 151 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 FABP7O15540 132 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 KCNJ5P48544 419 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 VEGFCP49767 419 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 GRIK4Q16099 956 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 TOR2AQ5JU69 321 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TMEM69Q5SWH9 247 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PDSS1Q5T2R2 415 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TIPARPQ7Z3E1 657 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 SLC51AQ86UW1 340 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 SLC35F3Q8IY50 421 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 KDM1BQ8NB78 822 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ATP6V1C2Q8NEY4 427 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 OR10K1Q8NGX5 313 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 HBEGFQ99075 208 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TKTL2Q9H0I9 626 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 MYNNQ9NPC7 610 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 KDM6BO15054 1643 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TRAV19A0A0A6YYK7 116 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 RPS17P08708 135 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 STAG3L1P0CL83 205 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PCSK2P16519 638 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CD34P28906 385 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 RGS8P57771 180 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 NANOGP8Q6NSW7 305 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 RPL13AP3Q6NVV1 102 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 EFCAB12Q6NXP0 572 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PAPD5Q8NDF8 572 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 THRSPQ92748 146 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TFAP2CQ92754 450 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 FAM84BQ96KN1 310 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 FCRL3Q96P31 734 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 ZCCHC2Q9C0B9 1178 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 OR51B5Q9H339 312 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 GNG13Q9P2W3 67 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 INTS6Q9UL03 887 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 ATG4BQ9Y4P1 393 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CXorf49A8MYA2 514 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 TISP43B9A030 160 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TMEM63AO94886 807 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 SLC16A8O95907 504 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 UBL4AP11441 157 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ADH7P40394 386 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 MAP3K8P41279 467 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 MLLT3P42568 568 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 TAS2R43P59537 309 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PPIGQ13427 754 aaKnown RBP eCLIP8.51□□□□□ -1.053e-7■■□□□ 13.1
YBX3-208ENST00000540447 OXA1LQ15070 435 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CNIH2Q6PI25 160 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CLEC9AQ6UXN8 241 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ZNF852Q6ZMS4 543 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 SUMF2Q8NBJ7 301 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 NSMAFQ92636 917 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 OR2M2Q96R28 347 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 ATG5Q9H1Y0 275 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PLEKHM1Q9Y4G2 1056 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TLL1O43897 1013 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PSMD10O75832 226 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 VIPP01282 170 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CELP19835 753 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 RPS14P62263 151 aaKnown RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 CDC42EP1Q00587 391 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PDZK1IP1Q13113 114 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PCLAFQ15004 111 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 RSU1Q15404 277 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 FAM189A2Q15884 450 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CARD16Q5EG05 197 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 FBXO48Q5FWF7 155 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CLEC12AQ5QGZ9 265 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PXT1Q8NFP0 134 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 OR10Q1Q8NGQ4 319 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 OR2A12Q8NGT7 310 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 CDCA7Q9BWT1 371 aaPredicted RBP8.51□□□□□ -1.05
YBX3-208ENST00000540447 KLHL21Q9UJP4 597 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 PCDHGB5Q9Y5G0 923 aa8.51□□□□□ -1.05
YBX3-208ENST00000540447 NUP153P49790 1475 aaKnown RBP8.5□□□□□ -1.05
YBX3-208ENST00000540447 ARL4DP49703 201 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 GTF2A2P52657 109 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 GDF10P55107 478 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 GTF2H2Q13888 395 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
YBX3-208ENST00000540447 GTF2H2CQ6P1K8 395 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 FAM217AQ8IXS0 508 aa8.5□□□□□ -1.05
YBX3-208ENST00000540447 ENTHD1Q8IYW4 607 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms