RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 KCNC1P48547 511 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 TPMTP51580 245 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ARF3P61204 181 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CRADDP78560 199 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MRPS10P82664 201 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ARF1P84077 181 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 IL10RBQ08334 325 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CDC20Q12834 499 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 IKBKEQ14164 716 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CRTC2Q53ET0 693 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ARHGAP15Q53QZ3 475 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 FBXL19Q6PCT2 694 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 SYVN1Q86TM6 617 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MIB1Q86YT6 1006 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 GANCQ8TET4 914 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 SLC38A4Q969I6 547 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MAPKAP1Q9BPZ7 522 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MMP28Q9H239 520 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 AGO3Q9H9G7 860 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 AMBNQ9NP70 447 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CREBZFQ9NS37 354 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PTGFRNQ9P2B2 879 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 FRMPD3Q5JV73 1810 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 TRAV6A0A075B6T7 132 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 A0A1W2PQ67 120 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PAGE1O75459 146 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 BEST1O76090 585 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ERVK-10P10266 1014 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 IGFBP5P24593 272 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 NDUFV1P49821 464 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 Q5PR19 223 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 REP15Q6BDI9 236 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF783Q6ZMS7 281 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF367Q7RTV3 350 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 R3HCC1LQ7Z5L2 792 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 WDR53Q7Z5U6 358 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PDZD9Q8IXQ8 264 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CPNE9Q8IYJ1 553 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 GHDCQ8N2G8 530 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PYROXD2Q8N2H3 581 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF615Q8N8J6 731 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 NANPQ8TBE9 248 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 STAG3L4Q8TBR4 150 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CANT1Q8WVQ1 401 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 SH3YL1Q96HL8 342 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF512Q96ME7 567 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 BARD1Q99728 777 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MIOSQ9NXC5 875 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 TO15178 435 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 LTA4HP09960 611 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CKBP12277 381 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CBR1P16152 277 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 GPR17Q13304 367 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 UGT3A2Q3SY77 523 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CTXN3Q4LDR2 81 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 KRBOX4Q5JUW0 171 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 C1orf189Q5VU69 101 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 KIAA0319Q5VV43 1072 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 GLYATQ6IB77 296 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF782Q6ZMW2 699 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 METTL3Q86U44 580 aaKnown RBP5.88□□□□□ -1.47
PTPRD-214ENST00000540109 TERB2Q8NHR7 220 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ARNTL2Q8WYA1 636 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 LPPQ93052 612 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PLD4Q96BZ4 506 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 GPR22Q99680 433 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 WACQ9BTA9 647 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 CXCL16Q9H2A7 254 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 POPDC3Q9HBV1 291 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 NMRK2Q9NPI5 230 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 MGAT4AQ9UM21 535 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 ALG5Q9Y673 324 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 PLXNA3P51805 1871 aa5.88□□□□□ -1.47
PTPRD-214ENST00000540109 FAM95CA0A1B0GW59 222 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 KANTRA0A1W2PQU2 76 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF705EA8MWA4 302 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SMAD9O15198 467 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 JRKO75564 520 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF432O94892 652 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TFAP2AP05549 437 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CHRNGP07510 517 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CLTBP09497 229 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RPL10P27635 214 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 LCN1P31025 176 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ACSL1P33121 698 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CBX5P45973 191 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ERVK-21P61565 698 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 POU4F2Q12837 409 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ILF3Q12906 894 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 HFE2Q6ZVN8 426 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SPATC1Q76KD6 591 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 NPAS4Q8IUM7 802 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZBTB44Q8NCP5 570 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 OR52K2Q8NGK3 314 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 OR14K1Q8NGZ2 314 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CEP76Q8TAP6 659 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 AIF1LQ9BQI0 150 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms