RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FKBP10Q96AY3 582 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 VPS39Q96JC1 886 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 VPS50Q96JG6 964 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 TRIM8Q9BZR9 551 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 SMYD2Q9NRG4 433 aa14.2□□□□□ -0.14
USB1-203ENST00000539737 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 A0A0J9YVX5 310 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 A0A1B0GUH1 482 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 VSTM2BA6NLU5 285 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 ZNF839A8K0R7 811 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 ARHGEF33A8MVX0 844 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 MYO1CO00159 1063 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 CCL21O00585 134 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 EIF2S1P05198 315 aaKnown RBP14.19□□□□□ -0.14
USB1-203ENST00000539737 TIAL1Q01085 375 aaKnown RBP eCLIP14.19□□□□□ -0.14
USB1-203ENST00000539737 SLMAPQ14BN4 828 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 KBTBD12Q3ZCT8 623 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.19□□□□□ -0.14
USB1-203ENST00000539737 YOD1Q5VVQ6 348 aaPredicted RBP14.19□□□□□ -0.14
USB1-203ENST00000539737 PIWIL4Q7Z3Z4 852 aaKnown RBP14.19□□□□□ -0.14
USB1-203ENST00000539737 STT3BQ8TCJ2 826 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 FBF1Q8TES7 1133 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 NR4A3Q92570 626 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 RELTQ969Z4 430 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 ZUFSPQ96AP4 578 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 LINGO1Q96FE5 620 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 RBBP8Q99708 897 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 SELENOSQ9BQE4 189 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 MCMBPQ9BTE3 642 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 TSPAN10Q9H1Z9 355 aaPredicted RBP14.19□□□□□ -0.14
USB1-203ENST00000539737 POPDC3Q9HBV1 291 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 NINJ2Q9NZG7 142 aa14.19□□□□□ -0.14
USB1-203ENST00000539737 CPAMD8Q8IZJ3 1885 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 PABPN1LA6NDY0 278 aaKnown RBP14.18□□□□□ -0.14
USB1-203ENST00000539737 CXorf49A8MYA2 514 aaPredicted RBP14.18□□□□□ -0.14
USB1-203ENST00000539737 STATHP02808 62 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 C8GP07360 202 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 COX6A1P12074 109 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 ACPPP15309 386 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 HSD17B2P37059 387 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 TNFSF10P50591 281 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 SLC12A2P55011 1212 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 IL2P60568 153 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 ADORA2A-AS1P86434 159 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 POU4F1Q01851 419 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 GRM7Q14831 915 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 ARHGAP19Q14CB8 494 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 SYT16Q17RD7 645 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 FAM214AQ32MH5 1076 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 WASHC2DQ5SRD0 308 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 TEX35Q5T0J7 233 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 PAQR3Q6TCH7 311 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 PPM1NQ8N819 430 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 OR9A1PQ8NGU1 263 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 HMGCLL1Q8TB92 370 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 ASB11Q8WXH4 323 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 TSPAN17Q96FV3 270 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 OLFM1Q99784 485 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 MIPEPQ99797 713 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 CDC42EP4Q9H3Q1 356 aaKnown RBP14.18□□□□□ -0.14
USB1-203ENST00000539737 WDR54Q9H977 334 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 UTP6Q9NYH9 597 aaKnown RBP14.18□□□□□ -0.14
USB1-203ENST00000539737 C3orf18Q9UK00 162 aa14.18□□□□□ -0.14
USB1-203ENST00000539737 TARM1B6A8C7 271 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 GFYI3L273 518 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 MAP2K7O14733 419 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 SLC16A5O15375 505 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 ZBTB14O43829 449 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 WDPCPO95876 746 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 C1QAP02745 245 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 ZGLP1P0C6A0 271 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 PRR35P0CG20 571 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 ITGAMP11215 1152 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 COX6B1P14854 86 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 ZNF37AP17032 561 aaPredicted RBP14.17□□□□□ -0.14
USB1-203ENST00000539737 SAT1P21673 171 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 SPRP35270 261 aaPredicted RBP14.17□□□□□ -0.14
USB1-203ENST00000539737 SOX11P35716 441 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 C3AR1Q16581 482 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 GRTP1Q5TC63 336 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 FCRLBQ6BAA4 426 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 UBE2R2Q712K3 238 aaPredicted RBP14.17□□□□□ -0.14
USB1-203ENST00000539737 GDF7Q7Z4P5 450 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 NKAPQ8N5F7 415 aaKnown RBP14.17□□□□□ -0.14
USB1-203ENST00000539737 EIF1ADQ8N9N8 165 aaKnown RBP14.17□□□□□ -0.14
USB1-203ENST00000539737 LRRN4CLQ8ND94 238 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 EEF1AKMT1Q8WVE0 214 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 C10orf90Q96M02 699 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 CYTH2Q99418 400 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 GPR22Q99680 433 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 YIPF2Q9BWQ6 316 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 HES7Q9BYE0 225 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.17□□□□□ -0.14
USB1-203ENST00000539737 SLC26A1Q9H2B4 701 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 TINAGQ9UJW2 476 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 NFU1Q9UMS0 254 aa14.17□□□□□ -0.14
USB1-203ENST00000539737 IGHV3-20A0A0C4DH32 117 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 HYKKA2RU49 373 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 SRPX2O60687 465 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms