RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C16orf58Q96GQ5 468 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 WDYHV1Q96HA8 205 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ZBED3Q96IU2 234 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 LRFN5Q96NI6 719 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ANKRD27Q96NW4 1050 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 MS4A10Q96PG2 267 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 BBS4Q96RK4 519 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 MNTQ99583 582 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ALG8Q9BVK2 526 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ELOVL1Q9BW60 279 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 IFT27Q9BW83 186 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ALOXE3Q9BYJ1 711 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 EGLN1Q9GZT9 426 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 NACA2Q9H009 215 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 NAPBQ9H115 298 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 EVA1AQ9H8M9 152 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 VAT1LQ9HCJ6 419 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 LZTFL1Q9NQ48 299 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM207AQ9NSI2 230 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CTNNAL1Q9UBT7 734 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 AMFRQ9UKV5 643 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 FZD1Q9UP38 647 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SH2B3Q9UQQ2 575 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ENTPD4Q9Y227 616 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 FOXA2Q9Y261 457 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 PPIP5K1Q6PFW1 1433 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 EP300Q09472 2414 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 NRXN2Q9P2S2 1712 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 PHLPP2Q6ZVD8 1323 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 LAMB1P07942 1786 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CCNB3Q8WWL7 1395 aa3.65□□□□□ -1.82
AC055720.1-201ENST00000539552 LOC100506127A0A0U1RQW1 187 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 A0A1B0GUL7 405 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 GAGE12BA1L429 117 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MACROD2A1Z1Q3 448 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 C17orf102A2RUQ5 167 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 OR52A4PA6NMU1 304 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 AP4M1O00189 453 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 LEFTY2O00292 366 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 PPIP5K2O43314 1243 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 PRAMEF11O60813 436 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TRIM3O75382 744 aaPredicted RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CSO75390 466 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 WBP4O75554 376 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CREG1O75629 220 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 KDM4BO94953 1096 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CSTAP01040 98 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 FESP07332 822 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 PLA2G4BP0C869 781 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ERVK-10P10266 1014 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 SPP1P10451 314 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 F3P13726 295 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ZNF18P17022 549 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 LBPP18428 481 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TNNI3P19429 210 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 NCF2P19878 526 aaPredicted RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ITGAXP20702 1163 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 U2AF2P26368 475 aaKnown RBP eCLIP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TKTP29401 623 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TYK2P29597 1187 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 S100A5P33763 92 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MMP13P45452 471 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 IER3P46695 156 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 SLC11A1P49279 550 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ENTPD1P49961 510 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CLCN4P51793 760 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CACNA2D1P54289 1103 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 HNRNPKP61978 463 aaKnown RBP eCLIP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 RPL23AP62750 156 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 NOP14P78316 857 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 HSF2Q03933 536 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 FOLH1Q04609 750 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 EGR4Q05215 589 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 RESTQ13127 1097 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MAB21L1Q13394 359 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 IL18Q14116 193 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 Q3ZCU0 254 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 NKAIN1Q4KMZ8 207 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TIGD2Q4W5G0 525 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MPPE1Q53F39 396 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 LBHQ53QV2 105 aaPredicted RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 FSCBQ5H9T9 825 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 LRRC73Q5JTD7 316 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 PHYHD1Q5SRE7 291 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 LDLRAP1Q5SW96 308 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 NCR3LG1Q68D85 454 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ERICH5Q6P6B1 374 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ENPP7Q6UWV6 458 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 PAQR9Q6ZVX9 377 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 EFL1Q7Z2Z2 1120 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 TMPRSS9Q7Z410 1059 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MTERF4Q7Z6M4 381 aaKnown RBP3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 CAMK1DQ8IU85 385 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 MISPQ8IVT2 679 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 NKAIN4Q8IVV8 208 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 ZDHHC23Q8IYP9 409 aa3.65□□□□□ -1.83
AC055720.1-201ENST00000539552 FBXO39Q8N4B4 442 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms