RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NDUFA5Q16718 116 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ATP13A5Q4VNC0 1218 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PLEKHS1Q5SXH7 462 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ANXA8L1Q5VT79 327 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TPRG1Q6ZUI0 275 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ZNF605Q86T29 641 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 CCDC103Q8IW40 242 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 METTL4Q8N3J2 472 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 RNF175Q8N4F7 328 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SLC5A8Q8N695 610 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 OR4C15Q8NGM1 316 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 WDR20Q8TBZ3 569 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SH3KBP1Q96B97 665 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TMEM184CQ9NVA4 438 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 QPCTLQ9NXS2 382 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 NDUFAF4Q9P032 175 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 KLHL3Q9UH77 587 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 BTBD3Q9Y2F9 522 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 GABRR3A8MPY1 467 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 A8MVJ9 347 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 PLK4O00444 970 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 SCAMP2O15127 329 aaKnown RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 DYRK3O43781 588 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 TLL1O43897 1013 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 MED26O95402 600 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 IGSF6O95976 241 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 STSP08842 583 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 SERPINA4P29622 427 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 ASMTP46597 345 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 RGS6P49758 472 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 UGT2B15P54855 530 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 OLR1P78380 273 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 SMAD3P84022 425 aaKnown RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 IRF8Q02556 426 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 ACSM2AQ08AH3 577 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 ARMCX4Q5H9R4 360 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 CPTPQ5TA50 214 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 CST9Q5W186 159 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 ACSM2BQ68CK6 577 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 CAMKMTQ7Z624 323 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 RASGRP3Q8IV61 690 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 VRK3Q8IV63 474 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 C11orf65Q8NCR3 313 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 OR10G2Q8NGC3 310 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 BCL7CQ8WUZ0 217 aaPredicted RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 CHTF18Q8WVB6 975 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 SKA2Q8WVK7 121 aaPredicted RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 COQ8BQ96D53 544 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 SCRN2Q96FV2 425 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
CDH13-204ENST00000539548 OR51E2Q9H255 320 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 EHD1Q9H4M9 534 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 AMBNQ9NP70 447 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 GPR83Q9NYM4 423 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 PPIL1Q9Y3C6 166 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 ALPK3Q96L96 1907 aa9.32□□□□□ -0.92
CDH13-204ENST00000539548 LOC100506127A0A0U1RQW1 187 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 KPNA5O15131 536 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 GREM1O60565 184 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ZNF821O75541 412 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 ADORA3P0DMS8 318 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 HSD3B1P14060 373 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 RPL17P18621 184 aaKnown RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 CD22P20273 847 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 HSD3B2P26439 372 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CASP3P42574 277 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 FLT3LGP49771 235 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ZNF157P51786 506 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 ACLYP53396 1101 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ST3GAL4Q11206 333 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 KCNC3Q14003 757 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 MICAQ29983 383 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 C10orf62Q5T681 223 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 C19orf48Q6RUI8 117 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CCBE1Q6UXH8 406 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 GDPD3Q7L5L3 318 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 METTL3Q86U44 580 aaKnown RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 SYTL1Q8IYJ3 562 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 NAGSQ8N159 534 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 C9orf43Q8TAL5 461 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 RAD18Q9NS91 495 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 MBD1Q9UIS9 605 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 PCDHGB6Q9Y5F9 930 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 BACE2Q9Y5Z0 518 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 LOC110117498-PIK3R3F6TDL0 507 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms