RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 USP36Q9P275 1121 aaKnown RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 ACSL5Q9ULC5 683 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 CYP8B1Q9UNU6 501 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 TCRBV5S2A0A599 114 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 KRBA1A5PL33 1030 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 FPGTO14772 594 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SEC22BO75396 215 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SLC22A3O75751 556 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SEMA4FO95754 770 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SLC35G4P0C7Q5 338 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 PNLIPRP1P54315 467 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 DMPKQ09013 629 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 FGD3Q5JSP0 725 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 OR5K2Q8NHB8 316 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 PROKR1Q8TCW9 393 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 FRG2BQ96QU4 278 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 INSM2Q96T92 566 aaPredicted RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 ALG2Q9H553 416 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 C6orf106Q9H6K1 298 aaPredicted RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SGK2Q9HBY8 427 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 KCNE2Q9Y6J6 123 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 UGDHO60701 494 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 NCK1P16333 377 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 HNRNPA2B1P22626 353 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 IL12AP29459 219 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 GRIK2Q13002 908 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 FZD5Q13467 585 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 NFYCQ13952 458 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 TCEA2Q15560 299 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZNF829Q3KNS6 432 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 RABL3Q5HYI8 236 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 CATSPEREQ5SY80 951 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 ENPP7Q6UWV6 458 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 SYT13Q7L8C5 426 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 PTRH1Q86Y79 214 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 DCUN1D3Q8IWE4 304 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 FRMD1Q8N878 549 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 DNAJB14Q8TBM8 379 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 MAGEE2Q8TD90 523 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 KCTD14Q9BQ13 255 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 SGPP1Q9BX95 441 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 NAA50Q9GZZ1 169 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 ACTL8Q9H568 366 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 SOX17Q9H6I2 414 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 CARS2Q9HA77 564 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 LRTM1Q9HBL6 345 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 ANAPC2Q9UJX6 822 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 A0A1W2PP18 115 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 TRIM64BA6NI03 449 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 CD247P20963 164 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 KELP23276 732 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 MRPL19P49406 292 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 LIPEQ05469 1076 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 UBXN2BQ14CS0 331 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 CCDC92Q53HC0 331 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 ADNP2Q6IQ32 1131 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 DCDC5Q6ZRR9 648 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 USP51Q70EK9 711 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 TBC1D21Q8IYX1 336 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 DEFB123Q8N688 67 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 PAPD5Q8NDF8 572 aaKnown RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 VPS33AQ96AX1 596 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 PDXPQ96GD0 296 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 SCARF2Q96GP6 870 aaPredicted RBP16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 VCANP13611 3396 aa16.44■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRSS38A1L453 326 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 RSL1D1O76021 490 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 SNAP29O95721 258 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 BCAP31P51572 246 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 C21orf59P57076 290 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 RAB15P59190 212 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 PTGR1Q14914 329 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 CLCA4Q14CN2 919 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 KIAA0040Q15053 153 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 NEDD8Q15843 81 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 SLCO4C1Q6ZQN7 724 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 RD3Q7Z3Z2 195 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMPRSS11BQ86T26 416 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 OR1E3Q8WZA6 343 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 TOE1Q96GM8 510 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 C12orf66Q96MD2 445 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 MTERF1Q99551 399 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 YTHDF1Q9BYJ9 559 aaKnown RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 C1orf109Q9NX04 203 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZIM2Q9NZV7 527 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 PNMA8BQ9ULN7 279 aaPredicted RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 DYTNA2CJ06 578 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 ASPDHA6ND91 283 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 ANKRD28O15084 1053 aa16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZBTB11O95625 1053 aaPredicted RBP16.43■□□□□ 0.22
PCDHB17P-201ENST00000539533 LDLRP01130 860 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms