RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RACK1P63244 317 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 TAP2Q03519 686 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 TRAP1Q12931 704 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 STX5Q13190 355 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 CHIT1Q13231 466 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 SRSF5Q13243 272 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 LRP8Q14114 963 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 KIAA0040Q15053 153 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 NR6A1Q15406 480 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 CYP2A13Q16696 494 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 C6orf52Q5T4I8 152 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 REP15Q6BDI9 236 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 GRHL2Q6ISB3 625 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 IYDQ6PHW0 289 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 CHST15Q7LFX5 561 aaPredicted RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 AMIGO2Q86SJ2 522 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 ZFAND4Q86XD8 727 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 DSELQ8IZU8 1212 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 WDR20Q8TBZ3 569 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 ADAMTS16Q8TE57 1224 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 TFGQ92734 400 aaPredicted RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 TSACCQ96A04 125 aaPredicted RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 RAD51AP1Q96B01 352 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 KLHDC7BQ96G42 594 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 CARS2Q9HA77 564 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 FARSBQ9NSD9 589 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 SPATA7Q9P0W8 599 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 SUCOQ9UBS9 1254 aaKnown RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 TMEM131Q92545 1883 aa8.52□□□□□ -1.05
DDB1-213ENST00000539332 ARID1BQ8NFD5 2236 aaPredicted RBP8.52□□□□□ -1.05
DDB1-213ENST00000539332 A0A1W2PR77 199 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 E7EQ34 232 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 TRIM38O00635 465 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 NRP2O60462 931 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 RSL1D1O76021 490 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 STAMBPO95630 424 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 PDYNP01213 254 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 WNT1P04628 370 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 SLC35G4P0C7Q5 338 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 HSD3B1P14060 373 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CAPN3P20807 821 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 JAK1P23458 1154 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 CD38P28907 300 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 AVPR2P30518 371 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 HSD17B2P37059 387 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 SRP54P61011 504 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 MRPS22P82650 360 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 IRF8Q02556 426 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CSTF3Q12996 717 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 ART3Q13508 389 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 DOC2AQ14183 400 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 FZD2Q14332 565 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.05
DDB1-213ENST00000539332 ALG11Q2TAA5 492 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 KIF19Q2TAC6 998 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 WDR45BQ5MNZ6 344 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 FRG2Q64ET8 278 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ATG9BQ674R7 924 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CAPN13Q6MZZ7 669 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 LAYNQ6UX15 382 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 WASH2PQ6VEQ5 465 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 SLCO4C1Q6ZQN7 724 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 RD3Q7Z3Z2 195 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 C11orf74Q86VG3 221 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 IQCHQ86VS3 1027 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 TBC1D21Q8IYX1 336 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 TMEM102Q8N9M5 508 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 FNDC5Q8NAU1 212 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 BHLHE22Q8NFJ8 381 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 OR5AR1Q8NGP9 310 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 GIPC3Q8TF64 312 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 SETD7Q8WTS6 366 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 NELL1Q92832 810 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ASB9Q96DX5 294 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 HSPBAP1Q96EW2 488 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 METTL2AQ96IZ6 378 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 CNDP2Q96KP4 475 aaKnown RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 FRG2BQ96QU4 278 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 OR2M4Q96R27 311 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CDRT15Q96T59 188 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ANKRD60Q9BZ19 345 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ACPTQ9BZG2 426 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ACTL8Q9H568 366 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 COPS7BQ9H9Q2 264 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 TM9SF3Q9HD45 589 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 WASH6PQ9NQA3 447 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 C1orf109Q9NX04 203 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 CCDC167Q9P0B6 97 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 TMEM9Q9P0T7 183 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 ZNF490Q9ULM2 529 aaPredicted RBP8.51□□□□□ -1.05
DDB1-213ENST00000539332 ASF1AQ9Y294 204 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 B3GNT3Q9Y2A9 372 aa8.51□□□□□ -1.05
DDB1-213ENST00000539332 TSC22D4Q9Y3Q8 395 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms