RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 OR4K3Q96R72 315 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 TRIM54Q9BYV2 358 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 SPNS1Q9H2V7 528 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 MKL2Q9ULH7 1088 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 NOVA2Q9UNW9 492 aaKnown RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 NTNG1Q9Y2I2 539 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 UTP11Q9Y3A2 253 aaKnown RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 PCDHGA10Q9Y5H3 936 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 UTP20O75691 2785 aaKnown RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 IGHV1-45A0A0A0MS14 117 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 TCRBV9S1A1TA0A576 114 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 BLACEA4D250 179 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 FAM159BA6NKW6 160 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 SGK494L7N484 410 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 CDC7O00311 574 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 RDH16O75452 317 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 KLHL18O94889 574 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 AGFG2O95081 481 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 NSA2O95478 260 aaKnown RBP14.17□□□□□ -0.14
RAB40B-202ENST00000538809 GRK3P35626 688 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 GLRBP48167 497 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 PLTPP55058 493 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 CAV1Q03135 178 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 NR6A1Q15406 480 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 CATSPEREQ5SY80 951 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 TMEM214Q6NUQ4 689 aaKnown RBP14.17□□□□□ -0.14
RAB40B-202ENST00000538809 NDUFAF7Q7L592 441 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 KBTBD2Q8IY47 623 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 NKAPQ8N5F7 415 aaKnown RBP14.17□□□□□ -0.14
RAB40B-202ENST00000538809 CAMKVQ8NCB2 501 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 BRIX1Q8TDN6 353 aaKnown RBP14.17□□□□□ -0.14
RAB40B-202ENST00000538809 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 TM4SF19Q96DZ7 209 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 THAP11Q96EK4 314 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 TSNARE1Q96NA8 513 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 HAUS8Q9BT25 410 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 SARGQ9BW04 601 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 RBCK1Q9BYM8 510 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 TGIF2Q9GZN2 237 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 RAB17Q9H0T7 212 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 EPS8L2Q9H6S3 715 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 POPDC3Q9HBV1 291 aa14.17□□□□□ -0.14
RAB40B-202ENST00000538809 OR2W5A6NFC9 320 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ZNF860A6NHJ4 632 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 H0YIG0 161 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 BMP10O95393 424 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 UQCRHP07919 91 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 GSTA2P09210 222 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 SLC35G6P0C7Q6 338 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 PRR35P0CG20 571 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 CCR8P51685 355 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 GUCY2DQ02846 1103 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ILF2Q12905 390 aaKnown RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 PCOLCEQ15113 449 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 EIF2S3LQ2VIR3 472 aaKnown RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 MINDY4Q4G0A6 757 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 FHL5Q5TD97 284 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 IGFL2Q6UWQ7 119 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ISLR2Q6UXK2 745 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 LANCL3Q6ZV70 420 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 PDSS2Q86YH6 399 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 SIRT6Q8N6T7 355 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 MFSD9Q8NBP5 474 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ZNF740Q8NDX6 193 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ABHD11Q8NFV4 315 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 OR4K1Q8NGD4 311 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 DNAJB14Q8TBM8 379 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 SLC13A3Q8WWT9 602 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 NEIL2Q969S2 332 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 MOCOSQ96EN8 888 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 C16orf45Q96MC5 204 aaPredicted RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 UNKQ9C0B0 810 aaKnown RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 VN1R1Q9GZP7 353 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 ANKHQ9HCJ1 492 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 RIC8BQ9NVN3 520 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 PTGFRNQ9P2B2 879 aa14.16□□□□□ -0.14
RAB40B-202ENST00000538809 MTO1Q9Y2Z2 717 aaKnown RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 DIDO1Q9BTC0 2240 aaKnown RBP14.16□□□□□ -0.14
RAB40B-202ENST00000538809 LOC102723996A0A087X1L8 192 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 IGHV3-20A0A0C4DH32 117 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 NDUFS4O43181 175 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 OR1F1O43749 312 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 SEMA7AO75326 666 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 B3GALT4O96024 378 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 SERPIND1P05546 499 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 C8orf89P0DMQ9 161 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 VARSP26640 1264 aaKnown RBP14.15□□□□□ -0.14
RAB40B-202ENST00000538809 XCR1P46094 333 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 CDKL1Q00532 357 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 POU4F1Q01851 419 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 CKAP4Q07065 602 aaKnown RBP14.15□□□□□ -0.14
RAB40B-202ENST00000538809 MFAP5Q13361 173 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 ZNF169Q14929 603 aaPredicted RBP14.15□□□□□ -0.14
RAB40B-202ENST00000538809 CRB2Q5IJ48 1285 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 TMEM205Q6UW68 189 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 C3orf62Q6ZUJ4 267 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 TMPRSS11BQ86T26 416 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 OR51Q1Q8NH59 317 aa14.15□□□□□ -0.14
RAB40B-202ENST00000538809 PRR7Q8TB68 274 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms