RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PELI2Q9HAT8 420 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 TXLNGQ9NUQ3 528 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 ANKMY1Q9P2S6 941 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 CAPN7Q9Y6W3 813 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 OR2A25A4D2G3 310 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 H7BY64 318 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 CLGNO14967 610 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 ZBTB11O95625 1053 aaPredicted RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 PRR35P0CG20 571 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 GNAZP19086 355 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 CD22P20273 847 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 VARSP26640 1264 aaKnown RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 CSNK1G2P78368 415 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 IRF8Q02556 426 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 KLF10Q13118 480 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 NAA25Q14CX7 972 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 C16orf72Q14CZ0 275 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 ABRAXAS2Q15018 415 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 ISXQ2M1V0 245 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 NXPE4Q6UWF7 544 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 KMT5CQ86Y97 462 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 CHCHD4Q8N4Q1 142 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 CPSF7Q8N684 471 aaKnown RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 ADAMTS14Q8WXS8 1223 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 NSL1Q96IY1 281 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 PRAP1Q96NZ9 151 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 SPNS1Q9H2V7 528 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 ACTR5Q9H9F9 607 aaPredicted RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 FAM60AQ9NP50 221 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 FARSBQ9NSD9 589 aaKnown RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 TMEM184CQ9NVA4 438 aa16.49■□□□□ 0.23
CLN6-202ENST00000538696 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
CLN6-202ENST00000538696 HAT1O14929 419 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 UBDO15205 165 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 VPS4BO75351 444 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 UNC5CO95185 931 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 ALDOCP09972 364 aaKnown RBP16.48■□□□□ 0.23
CLN6-202ENST00000538696 C1GALT1C1LP0DN25 315 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 LBPP18428 481 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 PIK3R1P27986 724 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 CCR8P51685 355 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 REEP5Q00765 189 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 MEF2AQ02078 507 aaPredicted RBP16.48■□□□□ 0.23
CLN6-202ENST00000538696 PCDH1Q08174 1060 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 DOC2AQ14183 400 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 E2F2Q14209 437 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 ZRSR2Q15696 482 aaKnown RBP16.48■□□□□ 0.23
CLN6-202ENST00000538696 TBCCQ15814 346 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 CPSF6Q16630 551 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLN6-202ENST00000538696 XKR6Q5GH73 641 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 ADCK2Q7Z695 626 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 FAM129CQ86XR2 697 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 OR4K1Q8NGD4 311 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 USP7Q93009 1102 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 ZUFSPQ96AP4 578 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 WDR34Q96EX3 536 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 DEPDC7Q96QD5 511 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 SOHLH2Q9NX45 425 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 SNX7Q9UNH6 387 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
CLN6-202ENST00000538696 AGRPO00253 132 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 UGDHO60701 494 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 CTSVO60911 334 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 WFS1O76024 890 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 KRT6AP02538 564 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 KRT6BP04259 564 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 JUPP14923 745 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 CD1EP15812 388 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 NELFEP18615 380 aaKnown RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 HRH2P25021 359 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 MLLT3P42568 568 aaPredicted RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 CPA2P48052 419 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 GABRA4P48169 554 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 KRT6CP48668 564 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 HSD11B2P80365 405 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 SQLEQ14534 574 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLN6-202ENST00000538696 KCNAB1Q14722 419 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 RNF165Q6ZSG1 346 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 Q6ZSR9 355 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 RNF44Q7L0R7 432 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 PLD3Q8IV08 490 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 D2HGDHQ8N465 521 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 TCTN2Q96GX1 697 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 MAGEB10Q96LZ2 347 aaPredicted RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 CHRNA10Q9GZZ6 450 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 EHD1Q9H4M9 534 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 SYNPO2LQ9H987 977 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 PFDN4Q9NQP4 134 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 GEMIN8Q9NWZ8 242 aaKnown RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
CLN6-202ENST00000538696 ZNF490Q9ULM2 529 aaPredicted RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 RRP15Q9Y3B9 282 aaKnown RBP16.47■□□□□ 0.23
CLN6-202ENST00000538696 CCL27Q9Y4X3 112 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms