RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CPPED1Q9BRF8 314 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 PRO3102Q9H379 93 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 SOX17Q9H6I2 414 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 UBAP1Q9NZ09 502 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 DYTNA2CJ06 578 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 GSTA4O15217 222 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 IDSP22304 550 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ACTR1BP42025 376 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MAPK9P45984 424 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ACTR1AP61163 376 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 KLC1Q07866 573 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 E2F2Q14209 437 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ANGPTL8Q6UXH0 198 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 TBC1D21Q8IYX1 336 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 SNX19Q92543 992 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MAL2Q969L2 176 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 FCRL1Q96LA6 429 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 BRF2Q9HAW0 419 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ADGRE2Q9UHX3 823 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ICKQ9UPZ9 632 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 AQP12BA6NM10 295 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PLPP1O14494 284 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PRKRAO75569 313 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 HOXB9P17482 250 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ENGP17813 658 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 GGT1P19440 569 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PLA2G16P53816 162 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MRPS21P82921 87 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 RPE65Q16518 533 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PAGE2BQ5JRK9 111 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ANKRD34AQ69YU3 496 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 HIST2H2AA3Q6FI13 130 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 LCTLQ6UWM7 567 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ERMP1Q7Z2K6 904 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF761Q86XN6 746 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 AQP12AQ8IXF9 295 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 OR2A1Q8NGT9 310 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ITCHQ96J02 903 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 CHID1Q9BWS9 393 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PREBQ9HCU5 417 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ACSL5Q9ULC5 683 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PCDHB3Q9Y5E6 796 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 CABIN1Q9Y6J0 2220 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 PLOD2O00469 737 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 MYO1DO94832 1006 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ERGP11308 486 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 AQP1P29972 269 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 UAP1L1Q3KQV9 507 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 CPTPQ5TA50 214 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 CBR4Q8N4T8 237 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 OR13H1Q8NG92 308 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 AICDAQ9GZX7 198 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-205ENST00000538545 KLF15Q9UIH9 416 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 SNX11Q9Y5W9 270 aa13.54□□□□□ -0.24
ACTN1-205ENST00000538545 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ELOVL7A1L3X0 281 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 CLIC1O00299 241 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 CLIC3O95833 236 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 NPPAP01160 153 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 IL3P08700 152 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-205ENST00000538545 LRIF1Q5T3J3 769 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ZCCHC8Q6NZY4 707 aaKnown RBP13.53□□□□□ -0.24
ACTN1-205ENST00000538545 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ZBTB49Q6ZSB9 765 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 HS3ST5Q8IZT8 346 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SHISA5Q8N114 240 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 TMEM132CQ8N3T6 1108 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SMPDL3AQ92484 453 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 GATA6Q92908 595 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 WDR34Q96EX3 536 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
ACTN1-205ENST00000538545 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 OR2M4Q96R27 311 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF624Q9P2J8 865 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-205ENST00000538545 FZD4Q9ULV1 537 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 A0A096LPI6 279 aa13.53□□□□□ -0.24
ACTN1-205ENST00000538545 SERTM1A2A2V5 107 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms