RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 OR1D4P47884 311 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 PCDH1Q08174 1060 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 GTF2H2Q13888 395 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 MAP7Q14244 749 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 SYT16Q17RD7 645 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 ZC3H12BQ5HYM0 836 aaKnown RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 TCHHL1Q5QJ38 904 aaPredicted RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 ZNF678Q5SXM1 525 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 TMEM214Q6NUQ4 689 aaKnown RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 GTF2H2CQ6P1K8 395 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 LETMD1Q6P1Q0 360 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 LRIG3Q6UXM1 1119 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 ZYG11AQ6WRX3 759 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 TTLL10Q6ZVT0 673 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 AMER3Q8N944 861 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 ARL8AQ96BM9 186 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 LRFN5Q96NI6 719 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 FANCEQ9HB96 536 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 SEMA4BQ9NPR2 832 aaPredicted RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 ZNF446Q9NWS9 450 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 CTSFQ9UBX1 484 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 GRID1Q9ULK0 1009 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 PLLPQ9Y342 182 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 RNF11Q9Y3C5 154 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 KCNE2Q9Y6J6 123 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 ATMQ13315 3056 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 HYKKA2RU49 373 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 ZNF860A6NHJ4 632 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 COPEO14579 308 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 DSCR3O14972 297 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 ETHE1O95571 254 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 IL1RNP18510 177 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 GNAZP19086 355 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 CASP2P42575 452 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 RPS15AP62244 130 aaKnown RBP12.45□□□□□ -0.42
CHFR-216ENST00000538235 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
CHFR-216ENST00000538235 IL10RAQ13651 578 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 XKR6Q5GH73 641 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 ASPGQ86U10 573 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 BPHLQ86WA6 291 aaPredicted RBP12.45□□□□□ -0.42
CHFR-216ENST00000538235 ARMC2Q8NEN0 867 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 TCP10LQ8TDR4 215 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 TLCD1Q96CP7 247 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 CLIP3Q96DZ5 547 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 L3HYPDHQ96EM0 354 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 FAM111AQ96PZ2 611 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 EHD1Q9H4M9 534 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 NOL11Q9H8H0 719 aaKnown RBP12.45□□□□□ -0.42
CHFR-216ENST00000538235 SERTAD3Q9UJW9 196 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 AP1M2Q9Y6Q5 423 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
CHFR-216ENST00000538235 TNRC6AQ8NDV7 1962 aaKnown RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 A0A0A6YYC8 382 aaPredicted RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 A0A0G2JN53 185 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 A0A1B0GX78 115 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 I3L1I5 382 aaPredicted RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 NDUFS4O43181 175 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 SRPX2O60687 465 aaPredicted RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 SMIM24O75264 130 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 ERLIN1O75477 346 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 UQCRHP07919 91 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 SMIM10L1P0DMW3 83 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 ATP5F1P24539 256 aaPredicted RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 HRH2P25021 359 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 HTR6P50406 440 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 PRKAA2P54646 552 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 FOXA1P55317 472 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 HERVK_113P63132 956 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 GRM7Q14831 915 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 TBCCQ15814 346 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 TTMPQ5BVD1 217 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 GRHL2Q6ISB3 625 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 TLDC1Q6P9B6 456 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 C19orf48Q6RUI8 117 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 UBE3DQ7Z6J8 389 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 SYVN1Q86TM6 617 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 LCA5Q86VQ0 697 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 C10orf107Q8IVU9 208 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 GPR135Q8IZ08 494 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 AFAP1L2Q8N4X5 818 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 ESX1Q8N693 406 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 OR9A4Q8NGU2 314 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 NT5CQ8TCD5 201 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 MR1Q95460 341 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 PTCD3Q96EY7 689 aaKnown RBP12.44□□□□□ -0.42
CHFR-216ENST00000538235 PGM2Q96G03 612 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 SMIM10Q96HG1 83 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 KCNA7Q96RP8 456 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 AIF1LQ9BQI0 150 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 ERVK-6Q9BXR3 956 aa12.44□□□□□ -0.42
CHFR-216ENST00000538235 IPPKQ9H8X2 491 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms