RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ATG9BQ674R7 924 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 TMPRSS11BQ86T26 416 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 HPS6Q86YV9 775 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 KLHDC8AQ8IYD2 350 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 ZCCHC10Q8TBK6 192 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 C8orf44Q96CB5 159 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 MOCOSQ96EN8 888 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 UBXN10Q96LJ8 280 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 MFRPQ9BY79 579 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 CLMPQ9H6B4 373 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 PELI2Q9HAT8 420 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 DYRK1BQ9Y463 629 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 MYO18BQ8IUG5 2567 aa14.02□□□□□ -0.17
USP28-204ENST00000537642 CTAGE15A4D2H0 777 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 NCF1BA6NI72 391 aaPredicted RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 NCF1CA8MVU1 366 aaPredicted RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 SGK494L7N484 410 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 MAP2K7O14733 419 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 TAPBPO15533 448 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 NDUFS4O43181 175 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 SORBS2O94875 1100 aaKnown RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 BMP10O95393 424 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 TUBB4AP04350 444 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 HEXBP07686 556 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 NCF1P14598 390 aaPredicted RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 ACPPP15309 386 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 ITGA3P26006 1051 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 GDF5P43026 501 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 SCTRP47872 440 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 CD97P48960 835 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 ATP6V0D1P61421 351 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 Q0VFX4 171 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 UBAP2Q5T6F2 1119 aaKnown RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 FAAH2Q6GMR7 532 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 JMJD6Q6NYC1 403 aaPredicted RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 CMC1Q7Z7K0 106 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 CTAGE6Q86UF2 777 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 PDSS2Q86YH6 399 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 GPSM1Q86YR5 675 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 PARP9Q8IXQ6 854 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 MNS1Q8NEH6 495 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 TMEM79Q9BSE2 394 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 ZBTB20Q9HC78 741 aaPredicted RBP14.01□□□□□ -0.17
USP28-204ENST00000537642 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 NINJ2Q9NZG7 142 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 PLAAQ9Y263 795 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 SLC22A7Q9Y694 548 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 KCNE2Q9Y6J6 123 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 SCN2AQ99250 2005 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 RELNP78509 3460 aa14.01□□□□□ -0.17
USP28-204ENST00000537642 A0A1W2PQ72 361 aa14□□□□□ -0.17
USP28-204ENST00000537642 KIF2AO00139 706 aaPredicted RBP14□□□□□ -0.17
USP28-204ENST00000537642 KLHL41O60662 606 aa14□□□□□ -0.17
USP28-204ENST00000537642 JRKO75564 520 aa14□□□□□ -0.17
USP28-204ENST00000537642 WDR47O94967 919 aa14□□□□□ -0.17
USP28-204ENST00000537642 HPP00738 406 aa14□□□□□ -0.17
USP28-204ENST00000537642 ALPPP05187 535 aa14□□□□□ -0.17
USP28-204ENST00000537642 CTAGE8P0CG41 777 aa14□□□□□ -0.17
USP28-204ENST00000537642 SLC35E2BP0CK96 405 aa14□□□□□ -0.17
USP28-204ENST00000537642 COX6A1P12074 109 aa14□□□□□ -0.17
USP28-204ENST00000537642 VARSP26640 1264 aaKnown RBP14□□□□□ -0.17
USP28-204ENST00000537642 DLG1Q12959 904 aa14□□□□□ -0.17
USP28-204ENST00000537642 PWP1Q13610 501 aa14□□□□□ -0.17
USP28-204ENST00000537642 SLMAPQ14BN4 828 aa14□□□□□ -0.17
USP28-204ENST00000537642 SLC6A19Q695T7 634 aa14□□□□□ -0.17
USP28-204ENST00000537642 IGFL3Q6UXB1 125 aa14□□□□□ -0.17
USP28-204ENST00000537642 CTAGE4Q8IX94 777 aa14□□□□□ -0.17
USP28-204ENST00000537642 AFAP1L2Q8N4X5 818 aa14□□□□□ -0.17
USP28-204ENST00000537642 TBC1D19Q8N5T2 526 aa14□□□□□ -0.17
USP28-204ENST00000537642 ANKRD53Q8N9V6 530 aa14□□□□□ -0.17
USP28-204ENST00000537642 Q8NA96 180 aa14□□□□□ -0.17
USP28-204ENST00000537642 OR51Q1Q8NH59 317 aa14□□□□□ -0.17
USP28-204ENST00000537642 NT5CQ8TCD5 201 aa14□□□□□ -0.17
USP28-204ENST00000537642 KIAA1191Q96A73 305 aa14□□□□□ -0.17
USP28-204ENST00000537642 MIB2Q96AX9 1013 aa14□□□□□ -0.17
USP28-204ENST00000537642 AIF1LQ9BQI0 150 aa14□□□□□ -0.17
USP28-204ENST00000537642 ZNF160Q9HCG1 818 aa14□□□□□ -0.17
USP28-204ENST00000537642 LUZP4Q9P127 313 aa14□□□□□ -0.17
USP28-204ENST00000537642 HCN3Q9P1Z3 774 aa14□□□□□ -0.17
USP28-204ENST00000537642 ZFP69BQ9UJL9 534 aa14□□□□□ -0.17
USP28-204ENST00000537642 MKL2Q9ULH7 1088 aa14□□□□□ -0.17
USP28-204ENST00000537642 NAALAD2Q9Y3Q0 740 aa14□□□□□ -0.17
USP28-204ENST00000537642 SHANK1Q9Y566 2161 aa14□□□□□ -0.17
USP28-204ENST00000537642 LOC102723996A0A087X1L8 192 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 HMX2A2RU54 273 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 TTLL8A6PVC2 850 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 RDH16O75452 317 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 IPO13O94829 963 aaKnown RBP13.99□□□□□ -0.17
USP28-204ENST00000537642 KLHL18O94889 574 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 SERPIND1P05546 499 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 ECHS1P30084 290 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 AHRP35869 848 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 GGT5P36269 586 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 XCR1P46094 333 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 KCNC1P48547 511 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 EEF1A2Q05639 463 aaKnown RBP13.99□□□□□ -0.17
USP28-204ENST00000537642 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms