RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HTR6P50406 440 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 ACY1Q03154 408 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 GPR19Q15760 415 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 TRPV3Q8NET8 790 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 PIWIL2Q8TC59 973 aaKnown RBP23.16■■□□□ 1.3
HMGA2-208ENST00000537429 ZNF473Q8WTR7 871 aaKnown RBP23.16■■□□□ 1.3
HMGA2-208ENST00000537429 SELENOMQ8WWX9 145 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 RERGQ96A58 199 aaPredicted RBP23.16■■□□□ 1.3
HMGA2-208ENST00000537429 ZNF501Q96CX3 271 aaPredicted RBP23.16■■□□□ 1.3
HMGA2-208ENST00000537429 FGF21Q9NSA1 209 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 H3BMH7 237 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 FOXE1O00358 373 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-208ENST00000537429 EDF1O60869 148 aaKnown RBP23.15■■□□□ 1.3
HMGA2-208ENST00000537429 CLEC3AO75596 197 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 TBX6O95947 436 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-208ENST00000537429 PDYNP01213 254 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 CTSBP07858 339 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 SERPINB1P30740 379 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 VSX2P58304 361 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-208ENST00000537429 CYP4F2P78329 520 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 ZNF33BQ06732 778 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 ASPGQ86U10 573 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 GALNT15Q8N3T1 639 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 RNF175Q8N4F7 328 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 BMPERQ8N8U9 685 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 SLC13A3Q8WWT9 602 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 MTERF1Q99551 399 aaKnown RBP23.15■■□□□ 1.3
HMGA2-208ENST00000537429 ENAMQ9NRM1 1142 aa23.15■■□□□ 1.3
HMGA2-208ENST00000537429 FAM149AA5PLN7 773 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 EFCAB7A8K855 629 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 TARDBPQ13148 414 aaKnown RBP eCLIP23.14■■□□□ 1.3
HMGA2-208ENST00000537429 TUBB3Q13509 450 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 DDX39BQ13838 428 aaKnown RBP23.14■■□□□ 1.3
HMGA2-208ENST00000537429 ABRAXAS2Q15018 415 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 SGO1Q5FBB7 561 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 RNF165Q6ZSG1 346 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 TWIST2Q8WVJ9 160 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 ZNF317Q96PQ6 595 aaPredicted RBP23.14■■□□□ 1.3
HMGA2-208ENST00000537429 OR6C1Q96RD1 312 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 TUBB1Q9H4B7 451 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 DMRT3Q9NQL9 472 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 PSD3Q9NYI0 1048 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 PPT2Q9UMR5 302 aa23.14■■□□□ 1.3
HMGA2-208ENST00000537429 SERTM1A2A2V5 107 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MAGEB17A8MXT2 336 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 TMEM150CB9EJG8 249 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 CHEK2O96017 543 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 FOXM1Q08050 763 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 PWP1Q13610 501 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 TCTE1Q5JU00 501 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 WASHC2DQ5SRD0 308 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 RAB11FIP2Q7L804 512 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 CAMKVQ8NCB2 501 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 NT5CQ8TCD5 201 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 HBEGFQ99075 208 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MACROD1Q9BQ69 325 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 BRF2Q9HAW0 419 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 FANCEQ9HB96 536 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 IRAK4Q9NWZ3 460 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MARCOQ9UEW3 520 aaPredicted RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 CCDC187A0A096LP49 1063 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 P2RX6O15547 441 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 NDUFS4O43181 175 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 HYAL3O43820 417 aaPredicted RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 EIF2S1P05198 315 aaKnown RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 SERPIND1P05546 499 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 SERPINA6P08185 405 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 VIMP08670 466 aaKnown RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 SLC35G6P0C7Q6 338 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 KITP10721 976 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 CCL4P13236 92 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 LSP1P33241 339 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 ID4P47928 161 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 RPS13P62277 151 aaKnown RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 PHEXP78562 749 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MC2RQ01718 297 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 HYAL2Q12891 473 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 EIF3IQ13347 325 aaKnown RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MANEAQ5SRI9 462 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 SCIMPQ6UWF3 145 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 TMPRSS7Q7RTY8 843 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 TRIM46Q7Z4K8 759 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MTERF4Q7Z6M4 381 aaKnown RBP23.13■■□□□ 1.29
HMGA2-208ENST00000537429 AFAP1L2Q8N4X5 818 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 CSNK1A1LQ8N752 337 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 OR1L3Q8NH93 324 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 FAR2Q96K12 515 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 MS4A8Q9BY19 250 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 FBXO8Q9NRD0 319 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 SERTAD3Q9UJW9 196 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 LOXL2Q9Y4K0 774 aa23.13■■□□□ 1.29
HMGA2-208ENST00000537429 B4E171 279 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 SLCO1B7G3V0H7 640 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 TXNDC9O14530 226 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 TGFB1P01137 390 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 STATHP02808 62 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 HSD3B1P14060 373 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 HSD3B2P26439 372 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 TSPAN7P41732 249 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 HK2P52789 917 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms