RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NXPE4Q6UWF7 544 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 PRSS41Q7RTY9 318 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 CCDC91Q7Z6B0 441 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 ZC3H7AQ8IWR0 971 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 TCAIMQ8N3R3 496 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 TBC1D19Q8N5T2 526 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 ZNF740Q8NDX6 193 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 OR9A4Q8NGU2 314 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 KIF18AQ8NI77 898 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 KIAA1191Q96A73 305 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 MACROD1Q9BQ69 325 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 COPG2Q9UBF2 871 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 MTRF1LQ9UGC7 380 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 ZFP69BQ9UJL9 534 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 DYRK1BQ9Y463 629 aa16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 SETXQ7Z333 2677 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-205ENST00000537164 LOC102723996A0A087X1L8 192 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 TAPBPO15533 448 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 OR1F1O43749 312 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 IPO13O94829 963 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 SORBS2O94875 1100 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 BMP10O95393 424 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 HPP00738 406 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 STATHP02808 62 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 ALPPP05187 535 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 ACPPP15309 386 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 GNAZP19086 355 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 CRABP2P29373 138 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 ECHS1P30084 290 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 EMP2P54851 167 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 FOXK1P85037 733 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 MEF2AQ02078 507 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 EFTUD2Q15029 972 aaKnown RBP eCLIP16.29■□□□□ 0.22e-10■■□□□ 12.8
SFSWAP-205ENST00000537164 OR4D1Q15615 310 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 SYT16Q17RD7 645 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 TMEM205Q6UW68 189 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 PDSS2Q86YH6 399 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 GPSM1Q86YR5 675 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 SPATA6LQ8N4H0 392 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 ANKRD53Q8N9V6 530 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 PDPRQ8NCN5 879 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 NT5CQ8TCD5 201 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 CYTH2Q99418 400 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 AIF1LQ9BQI0 150 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 TRIM4Q9C037 500 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 NINJ2Q9NZG7 142 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 COL12A1Q99715 3063 aa16.29■□□□□ 0.2
SFSWAP-205ENST00000537164 FLNBO75369 2602 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 HMX2A2RU54 273 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 MASP2O00187 686 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 IL1RNP18510 177 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 PHBP35232 272 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 GDF5P43026 501 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 EFNA3P52797 238 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 MAT1AQ00266 395 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 HERC3Q15034 1050 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 SULT1C3Q6IMI6 304 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 NIPAL1Q6NVV3 410 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 JMJD6Q6NYC1 403 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 IGFL2Q6UWQ7 119 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 SLCO4C1Q6ZQN7 724 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 CMC1Q7Z7K0 106 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 ISCA2Q86U28 154 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 PRSS58Q8IYP2 241 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 RBMXL3Q8N7X1 1067 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 TRPV3Q8NET8 790 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 MOCOSQ96EN8 888 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 FMO2Q99518 471 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 MESP1Q9BRJ9 268 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 TMEM79Q9BSE2 394 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 CAPS2Q9BXY5 557 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 UNKQ9C0B0 810 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 SLC6A16Q9GZN6 736 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 PITHD1Q9GZP4 211 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 EHD1Q9H4M9 534 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 CNOT10Q9H9A5 744 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 ANKHQ9HCJ1 492 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 GPRC5BQ9NZH0 403 aa16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 PTBP2Q9UKA9 531 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-205ENST00000537164 MAP2K7O14733 419 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 FFAR3O14843 346 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 GPR42O15529 346 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 NDUFS4O43181 175 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 WDR47O94967 919 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 C1GALT1C1LP0DN25 315 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 COX6A1P12074 109 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 IL10P22301 178 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 KCNC1P48547 511 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 CD97P48960 835 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 KCNC4Q03721 635 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 Q0VFX4 171 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 HYAL2Q12891 473 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 DLG1Q12959 904 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 CDC16Q13042 620 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 RAPSNQ13702 412 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 SLMAPQ14BN4 828 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms