RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 ZNF451Q9Y4E5 1061 aa13.53□□□□□ -0.24
UBE3B-206ENST00000536398 TRBC2A0A5B9 178 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 WDR47O94967 919 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 SERPIND1P05546 499 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 HEXBP07686 556 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 CTAGE8P0CG41 777 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 SLC35E2BP0CK96 405 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 ITGA3P26006 1051 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 SCTRP47872 440 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 SLC6A12P48065 614 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 EMP2P54851 167 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 MYBPC3Q14896 1274 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 TGFBIQ15582 683 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 GPSM1Q86YR5 675 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 CTAGE4Q8IX94 777 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 ANKRD53Q8N9V6 530 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 NACC2Q96BF6 587 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 TMEM79Q9BSE2 394 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 SARGQ9BW04 601 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 MKKSQ9NPJ1 570 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-206ENST00000536398 IGSF5Q9NSI5 407 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 PLAAQ9Y263 795 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 MAP4K5Q9Y4K4 846 aa13.52□□□□□ -0.25
UBE3B-206ENST00000536398 ZNF860A6NHJ4 632 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 IDSB3KWA1 339 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 NDUFS4O43181 175 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 PRAMEF4O60810 478 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 RDH16O75452 317 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 BMP10O95393 424 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 IGHEP01854 428 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 HNF4AP41235 474 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 AVPR1BP47901 424 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 HNMTP50135 292 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 SOX8P57073 446 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 REEP5Q00765 189 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 KCNC4Q03721 635 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 EEF1A2Q05639 463 aaKnown RBP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 ILF2Q12905 390 aaKnown RBP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
UBE3B-206ENST00000536398 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 PRAMEF9Q5VWM5 478 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 SLCO4C1Q6ZQN7 724 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 KLHDC8AQ8IYD2 350 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 OR51Q1Q8NH59 317 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 EXT2Q93063 718 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 KLHL31Q9H511 634 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 PELI2Q9HAT8 420 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 ZNF160Q9HCG1 818 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 MKL2Q9ULH7 1088 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 ASB1Q9Y576 335 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 TENM4Q6N022 2769 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 SCN3AQ9NY46 2000 aa13.51□□□□□ -0.25
UBE3B-206ENST00000536398 H0YIG0 161 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 KLHL18O94889 574 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ACSL3O95573 720 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 CELA2AP08217 269 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 COX6A1P12074 109 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ACPPP15309 386 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 HSPA7P48741 367 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 CSRP3P50461 194 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ATP6V0D1P61421 351 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 OLR1P78380 273 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 IRF9Q00978 393 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 HYAL2Q12891 473 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 NAB1Q13506 487 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-206ENST00000536398 VWA5B1Q5TIE3 1220 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 JMJD6Q6NYC1 403 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ISCA2Q86U28 154 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 RELL1Q8IUW5 271 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 AFAP1L2Q8N4X5 818 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 Q8NA96 180 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 CREB3L4Q8TEY5 395 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 KIAA1191Q96A73 305 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 NXNL1Q96CM4 212 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 THOC3Q96J01 351 aaKnown RBP13.5□□□□□ -0.25
UBE3B-206ENST00000536398 RBCK1Q9BYM8 510 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 AICDAQ9GZX7 198 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 CDC42EP4Q9H3Q1 356 aaKnown RBP13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ALG9Q9H6U8 611 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ANKHQ9HCJ1 492 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 C14orf105Q9NVL8 296 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 WWOXQ9NZC7 414 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 CD274Q9NZQ7 290 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 ZFP69BQ9UJL9 534 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms