RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 NMBRP28336 390 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 TPP2P29144 1249 aaPredicted RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 CHRNB4P30926 498 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 STIP1P31948 543 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 PTGER1P34995 402 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 RFC3P40938 356 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 BCL6P41182 706 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 CYB561P49447 251 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 OR4D2P58180 307 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 RPS15AP62244 130 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 TBX2Q13207 712 aaPredicted RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 KLF1Q13351 362 aaPredicted RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 SNX1Q13596 522 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 TTLL9Q3SXZ7 439 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ACSBG2Q5FVE4 666 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 PRUNE1Q86TP1 453 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 RPS19BP1Q86WX3 136 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 CYP4X1Q8N118 509 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ARHGEF39Q8N4T4 335 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 TC2NQ8N9U0 490 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 CHDHQ8NE62 594 aaPredicted RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 FAM57AQ8TBR7 257 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ZNF480Q8WV37 535 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ASB5Q8WWX0 329 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 LPGAT1Q92604 370 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 NRGNQ92686 78 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 TSLPQ969D9 159 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 PEX11GQ96HA9 241 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 BIRC8Q96P09 236 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 OLFM1Q99784 485 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 IL22Q9GZX6 179 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 NAALAD2Q9Y3Q0 740 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 EPN1Q9Y6I3 576 aaPredicted RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 MAGEB17A8MXT2 336 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 MIF4GDA9UHW6 222 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 E7ENX8 843 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 LIASO43766 372 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 KIF5CO60282 957 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 PDE9AO76083 593 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 FTCDO95954 541 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 SLC35G6P0C7Q6 338 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 DRD2P14416 443 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 ETS1P14921 441 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 MEOX1P50221 254 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 ITGA8P53708 1063 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 SLC26A5P58743 744 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 BASP1P80723 227 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 TAP2Q03519 686 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 RELAQ04206 551 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 CUL1Q13616 776 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 KCNJ11Q14654 390 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 USP10Q14694 798 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 CES4AQ5XG92 561 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TMEM211Q6ICI0 200 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TMEM214Q6NUQ4 689 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 CES3Q6UWW8 571 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 FGD2Q7Z6J4 655 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 KIAA1328Q86T90 577 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 CCDC71Q8IV32 467 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 CHERPQ8IWX8 916 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 SYCE1Q8N0S2 351 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 LGI4Q8N135 537 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 KIF2BQ8N4N8 673 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 LRRC57Q8N9N7 239 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 ACBD4Q8NC06 268 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 CAMKVQ8NCB2 501 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 C1orf54Q8WWF1 131 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 RND1Q92730 232 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 PANX2Q96RD6 677 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TREX2Q9BQ50 279 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 UCK2Q9BZX2 261 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TP63Q9H3D4 680 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 CCDC177Q9NQR7 707 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 NPDC1Q9NQX5 325 aaPredicted RBP7.55□□□□□ -1.2
CHFR-211ENST00000535897 TREX1Q9NSU2 369 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TMEM184CQ9NVA4 438 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 BFARQ9NZS9 450 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 PAK5Q9P286 719 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 GALPQ9UBC7 116 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 RNF6Q9Y252 685 aa7.55□□□□□ -1.2
CHFR-211ENST00000535897 HCFC1P51610 2035 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 KCNE1BA0A087WTH5 132 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 CTAGE9A4FU28 777 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 KLRC4-KLRK1H3BQV0 150 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 AP3B1O00203 1094 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 FCHO1O14526 889 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 ZBTB14O43829 449 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 HS6ST1O60243 411 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 B4GALT2O60909 372 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 IGFBP2P18065 325 aa7.54□□□□□ -1.2
CHFR-211ENST00000535897 JAK1P23458 1154 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms