RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 HRH2P25021 359 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 GRK3P35626 688 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 HNF4AP41235 474 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 CHIT1Q13231 466 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 GTF2H2Q13888 395 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 KRT71Q3SY84 523 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 NKAIN1Q4KMZ8 207 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 MLIPQ5VWP3 458 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 GTF2H2CQ6P1K8 395 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 SHISA6Q6ZSJ9 500 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 TRABD2AQ86V40 505 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 CDK15Q96Q40 435 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 PPCSQ9HAB8 311 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 ZBTB26Q9HCK0 441 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 ENAMQ9NRM1 1142 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 GPRC5BQ9NZH0 403 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 PCTPQ9UKL6 214 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 KCNE1BA0A087WTH5 132 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 A0A0G2JN53 185 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 A0A1B0GTL3 188 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 C9J4A7 227 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 OR7A17O14581 309 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 DLX3O60479 287 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 SMIM24O75264 130 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 SPAG7O75391 227 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 PROCP04070 461 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 HBQ1P09105 142 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 ZNF888P0CJ79 500 aaPredicted RBP13.33□□□□□ -0.28
VPS11-205ENST00000534551 AGXTP21549 392 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 ARSFP54793 590 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 OLR1P78380 273 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
VPS11-205ENST00000534551 IRF8Q02556 426 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 RELAQ04206 551 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 CDC20Q12834 499 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 HYAL2Q12891 473 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS11-205ENST00000534551 MUM1Q2TAK8 710 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 PDSS2Q86YH6 399 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 MYLK4Q86YV6 388 aaPredicted RBP13.33□□□□□ -0.28
VPS11-205ENST00000534551 PRSS58Q8IYP2 241 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 RIBC1Q8N443 379 aaPredicted RBP13.33□□□□□ -0.28
VPS11-205ENST00000534551 AMER3Q8N944 861 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 OR52B6Q8NGF0 335 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 OR9A4Q8NGU2 314 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 SLC13A3Q8WWT9 602 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 CCT6BQ92526 530 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 SLC45A3Q96JT2 553 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 MESP1Q9BRJ9 268 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 SARGQ9BW04 601 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 DRC3Q9H069 523 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 KLHL31Q9H511 634 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
VPS11-205ENST00000534551 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 CACNA1GO43497 2377 aa13.33□□□□□ -0.28
VPS11-205ENST00000534551 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 C21orf140B9A014 251 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 STX16-NPEPL1H3BU86 382 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 SGK494L7N484 410 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 PPP6CO00743 305 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 STX16O14662 325 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 DNAJB6O75190 326 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 SH3BGRLO75368 114 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 RDH16O75452 317 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 EPB42P16452 691 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 FBLP22087 321 aaKnown RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 PTPN4P29074 926 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 EFNA3P52797 238 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 UCNP55089 124 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 CDH13P55290 713 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 SLC18A2Q05940 514 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 TOR1AIP1Q5JTV8 583 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 BEND6Q5SZJ8 279 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 TMIGD1Q6UXZ0 262 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 CAMKVQ8NCB2 501 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 CREB3L4Q8TEY5 395 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 THAP11Q96EK4 314 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 WDR34Q96EX3 536 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 PTCD3Q96EY7 689 aaKnown RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 APOPT1Q96IL0 206 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 NLNQ9BYT8 704 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 SOX17Q9H6I2 414 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 SEMA4BQ9NPR2 832 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 HCN3Q9P1Z3 774 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 ZFP69BQ9UJL9 534 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms