RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CREG1O75629 220 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 NPR2P20594 1047 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 MPIP34949 423 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 BLKP51451 505 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 OR2B6P58173 313 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 KLHDC10Q6PID8 442 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 SLC6A15Q9H2J7 730 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 NEK6Q9HC98 313 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 MRPS17Q9Y2R5 130 aaKnown RBP16.69■□□□□ 0.26
PHRF1-206ENST00000534320 PHIPQ8WWQ0 1821 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 LAMB2P55268 1798 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 SLC16A5O15375 505 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
PHRF1-206ENST00000534320 CTSAP10619 480 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 ANXA8P13928 327 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 DNAJA1P31689 397 aaKnown RBP16.69■□□□□ 0.26
PHRF1-206ENST00000534320 ALG11Q2TAA5 492 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 NANOGP8Q6NSW7 305 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 HMGB4Q8WW32 186 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF285Q96NJ3 590 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 NANOGQ9H9S0 305 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 TPT1P8Q9HAU6 139 aa16.69■□□□□ 0.26
PHRF1-206ENST00000534320 GOLGA4Q13439 2230 aaKnown RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 PRSS51A0A1B0GVH4 220 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 RSL1D1O76021 490 aaKnown RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ITPKBP27987 946 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 RAB30Q15771 203 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 HMBOX1Q6NT76 420 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 SUSD1Q6UWL2 747 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 NCCRP1Q6ZVX7 275 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 PIGXQ8TBF5 258 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 COPS4Q9BT78 406 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 MED11Q9P086 117 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 RIMKLBQ9ULI2 386 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 KCNK6Q9Y257 313 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 C9P02748 559 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF8P17098 575 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 CSNK2A2P19784 350 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ALAS2P22557 587 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 AP3S2P59780 193 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 OR2T5Q6IEZ7 315 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 OR2T29Q8NH02 315 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 TPK1Q9H3S4 243 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 THUMPD1Q9NXG2 353 aaKnown RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 I3L521 148 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 GRID2O43424 1007 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 TPST2O60704 377 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 DEFA5Q01523 94 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ASRGL1Q7L266 308 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 DNAJC15Q9Y5T4 150 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 RREB1Q92766 1687 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 AURKAO14965 403 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 REM1O75628 298 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 BPIP17213 487 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ALDH4A1P30038 563 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 SLC9A3P48764 834 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 E2F2Q14209 437 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 PTGR1Q14914 329 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 NPAS3Q8IXF0 933 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 LSM14AQ8ND56 463 aaKnown RBP16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ZFAND2BQ8WV99 257 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 SLC2A11Q9BYW1 496 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ABCB9Q9NP78 766 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 AIG1Q9NVV5 245 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 ATPIF1Q9UII2 106 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 MKLN1Q9UL63 735 aa16.68■□□□□ 0.26
PHRF1-206ENST00000534320 PRAMEF33A0A0G2JMD5 474 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PRAMEF10O60809 474 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF432O94892 652 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 OPN1SWP03999 348 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TAS2R50P59544 299 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PHC2Q8IXK0 858 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 OR10G2Q8NGC3 310 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 BADQ92934 168 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 SLC38A3Q99624 504 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TOR3AQ9H497 397 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 C11orf16Q9NQ32 467 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PRORSD1PA6NEY8 169 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 HOXB2P14652 356 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF648Q5T619 568 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 LIPJQ5W064 366 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 RANBP3LQ86VV4 465 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 DRAXINQ8NBI3 349 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 SORCS1Q8WY21 1168 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PYURFQ96I23 114 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 RNF38Q9H0F5 515 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PREBQ9HCU5 417 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PLAGL1Q9UM63 463 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms