RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZDHHC18Q9NUE0 388 aa28.71■■■□□ 2.19
SSSCA1-207ENST00000533115 HPP00738 406 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 CCDC166P0CW27 439 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 IL1RNP18510 177 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 ZKSCAN8Q15776 578 aaPredicted RBP28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 SLC6A19Q695T7 634 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 ZNF740Q8NDX6 193 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 ZCCHC10Q8TBK6 192 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 PNPLA2Q96AD5 504 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 PELI2Q9HAT8 420 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 KCNE2Q9Y6J6 123 aa28.7■■■□□ 2.18
SSSCA1-207ENST00000533115 BMP10O95393 424 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 CXCR2P25025 360 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 TGFBIQ15582 683 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 IRAK1BP1Q5VVH5 260 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 TM9SF4Q92544 642 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 RHBDF1Q96CC6 855 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 LHPPQ9H008 270 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 SPNS1Q9H2V7 528 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 ZNF160Q9HCG1 818 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 MKL2Q9ULH7 1088 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 SLC22A7Q9Y694 548 aa28.69■■■□□ 2.18
SSSCA1-207ENST00000533115 SGK494L7N484 410 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 PCDH17O14917 1159 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 NDUFS4O43181 175 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 FAM155BO75949 473 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 SCTRP47872 440 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 CD97P48960 835 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 RAB10P61026 200 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 ATP6V0D1P61421 351 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 Q0VFX4 171 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 NAB1Q13506 487 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 PWP1Q13610 501 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 FAAH2Q6GMR7 532 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 NXPE4Q6UWF7 544 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 NDUFAF7Q7L592 441 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 KLHDC8AQ8IYD2 350 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 MMGT1Q8N4V1 131 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 Q8NA96 180 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 CPT1CQ8TCG5 803 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 MOCOSQ96EN8 888 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 SLAMF7Q9NQ25 335 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 DOCK10Q96BY6 2186 aa28.68■■■□□ 2.18
SSSCA1-207ENST00000533115 A0A1W2PQ72 361 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 NCF1BA6NI72 391 aaPredicted RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 NCF1CA8MVU1 366 aaPredicted RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 COX6A1P12074 109 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 NCF1P14598 390 aaPredicted RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 CD1DP15813 335 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 SLC6A12P48065 614 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 REEP5Q00765 189 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 C18orf21Q32NC0 220 aaPredicted RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 AGAP7PQ5VUJ5 663 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 TMPRSS11BQ86T26 416 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 PDSS2Q86YH6 399 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 OR51Q1Q8NH59 317 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 THOC3Q96J01 351 aaKnown RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 UBXN10Q96LJ8 280 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 AGAP4Q96P64 663 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 AIF1LQ9BQI0 150 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 ZBTB20Q9HC78 741 aaPredicted RBP28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 LUZP4Q9P127 313 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 HCN3Q9P1Z3 774 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 ZFP69BQ9UJL9 534 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 NAALAD2Q9Y3Q0 740 aa28.67■■■□□ 2.18
SSSCA1-207ENST00000533115 NSG1A0A0A6YYJ2 146 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 WDR47O94967 919 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 SERPIND1P05546 499 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 AHRP35869 848 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 GDF5P43026 501 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 HERC3Q15034 1050 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 TMEM205Q6UW68 189 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 GPSM1Q86YR5 675 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 ZADH2Q8N4Q0 377 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 NT5CQ8TCD5 201 aa28.66■■■□□ 2.18
SSSCA1-207ENST00000533115 SCN3AQ9NY46 2000 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 LOC102723996A0A087X1L8 192 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 RDH16O75452 317 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 JRKO75564 520 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 KLHL18O94889 574 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 TUBB4AP04350 444 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 XCR1P46094 333 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 EFNA3P52797 238 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 EEF1A2Q05639 463 aaKnown RBP28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 RGS1Q08116 209 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 SLMAPQ14BN4 828 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 EFTUD2Q15029 972 aaKnown RBP eCLIP28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 PLEKHN1Q494U1 663 aaPredicted RBP28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 ATCAYQ86WG3 371 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 SHISA5Q8N114 240 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 TCAIMQ8N3R3 496 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 AFAP1L2Q8N4X5 818 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 EFCAB3Q8N7B9 438 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 MNS1Q8NEH6 495 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 B3GNT3Q9Y2A9 372 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 FLNCQ14315 2725 aa28.65■■■□□ 2.18
SSSCA1-207ENST00000533115 IGHV1-45A0A0A0MS14 117 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 GNAZP19086 355 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 OR4D1Q15615 310 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 CDKL4Q5MAI5 379 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms