RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MTBPQ96DY7 904 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 MVB12AQ96EY5 273 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 SMIM10Q96HG1 83 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 CATSPER2Q96P56 530 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 EHD1Q9H4M9 534 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 NT5DC2Q9H857 520 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 CNOT10Q9H9A5 744 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 ZNF304Q9HCX3 659 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 CTSFQ9UBX1 484 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 ZFP69BQ9UJL9 534 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 ZNF490Q9ULM2 529 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 KCNMB2Q9Y691 235 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 MAU2Q9Y6X3 613 aa13.25□□□□□ -0.29
TSPAN4-220ENST00000532375 SMG1Q96Q15 3661 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 BSNQ9UPA5 3926 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 A0A1W2PPM1 405 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 CDC14CA4D256 554 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 SUPT3HB4E1H0 165 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 C9J4A7 227 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 SUPT3HO75486 399 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 GRK3P35626 688 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 PWP1Q13610 501 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 DSG2Q14126 1118 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 DOC2AQ14183 400 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 PCBP2Q15366 365 aaKnown RBP eCLIP13.24□□□□□ -0.294e-6■■■■□ 20.8
TSPAN4-220ENST00000532375 DEFB109BQ30KR1 87 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 LRRC70Q7Z2Q7 622 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 VN1R5Q7Z5H4 357 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 PDSS2Q86YH6 399 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 CAMKVQ8NCB2 501 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 NT5CQ8TCD5 201 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 UBLCP1Q8WVY7 318 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 CABS1Q96KC9 395 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 AIF1LQ9BQI0 150 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 CAPS2Q9BXY5 557 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 SEMA4CQ9C0C4 833 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 WDR54Q9H977 334 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 PSMC3IPQ9P2W1 217 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 PTRH2Q9Y3E5 179 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 SLC22A7Q9Y694 548 aa13.24□□□□□ -0.29
TSPAN4-220ENST00000532375 SCN2AQ99250 2005 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 DOCK10Q96BY6 2186 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 A0A0A6YYC8 382 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 SYCE1LA8MT33 242 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 I3L1I5 382 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 K7EPI3 171 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 CCNT2O60583 730 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 DNAJB6O75190 326 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 CD63P08962 238 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 RBP1P09455 135 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 EFNA3P52797 238 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 ALDH18A1P54886 795 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 SSPNQ14714 243 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 TBCCQ15814 346 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 PDK4Q16654 411 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 PFKFB4Q16877 469 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 TSNAXIP1Q2TAA8 658 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 ADNP2Q6IQ32 1131 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 OR9A4Q8NGU2 314 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 SLC6A16Q9GZN6 736 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 DRC3Q9H069 523 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 TMEM216Q9P0N5 145 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 POLHQ9Y253 713 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 NUP210LQ5VU65 1888 aa13.23□□□□□ -0.29
TSPAN4-220ENST00000532375 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 C4orf51C9J302 202 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 H0YIG0 161 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 TK2O00142 265 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 E2F3O00716 465 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 FFAR3O14843 346 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 GPR42O15529 346 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 SIX3O95343 332 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 NSA2O95478 260 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 B3GALT4O96024 378 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 NUDT17P0C025 328 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 LY6DQ14210 128 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 SYT16Q17RD7 645 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 VWA2Q5GFL6 755 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 KLC3Q6P597 504 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 TMIGD1Q6UXZ0 262 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 PPP1R32Q7Z5V6 425 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 APLFQ8IW19 511 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms