RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 VRK3Q8IV63 474 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 IGDCC3Q8IVU1 814 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TBC1D21Q8IYX1 336 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 UNC5BQ8IZJ1 945 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 MNS1Q8NEH6 495 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR52E1Q8NGJ3 308 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR5AR1Q8NGP9 310 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR5K2Q8NHB8 316 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CEP70Q8NHQ1 597 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CFAP61Q8NHU2 1237 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 KIF18AQ8NI77 898 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 KCNE4Q8WWG9 221 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ART4Q93070 314 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 FAM136AQ96C01 138 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 NMD3Q96D46 503 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CERS2Q96G23 380 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CFAP36Q96G28 342 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 FOPNLQ96NB1 174 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PTCHD1Q96NR3 888 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CD180Q99467 661 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTRCQ99895 268 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TUBB2BQ9BVA1 445 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 DDA1Q9BW61 102 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 B3GNT4Q9C0J1 378 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF768Q9H5H4 540 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 XKR8Q9H6D3 395 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 FBXO6Q9NRD1 293 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 IARS2Q9NSE4 1012 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PNPOQ9NVS9 261 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TMEM160Q9NX00 188 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 OCIAD1Q9NX40 245 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 FBXO5Q9UKT4 447 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 C19orf53Q9UNZ5 99 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CDYLQ9Y232 598 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TDRKHQ9Y2W6 561 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 SNX8Q9Y5X2 465 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TEX264Q9Y6I9 313 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 SPEGQ15772 3267 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PTPRBP23467 1997 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CEP295Q9C0D2 2601 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLXNB3Q9ULL4 1909 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 IGHV5-51A0A0C4DH38 117 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PIPSLA2A3N6 862 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTAGE15A4D2H0 777 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 TLCD2A6NGC4 264 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 AQP12BA6NM10 295 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 E7ESA3 106 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 STMND1H3BQB6 276 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 BTN3A3O00478 584 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 BTN3A1O00481 513 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 POLR1CO15160 346 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 VPS26AO75436 327 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF205O95201 554 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 APOL3O95236 402 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 WISP1O95388 367 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 F7P08709 466 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTAGE8P0CG41 777 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 COL6A2P12110 1019 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 DRD2P14416 443 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 NELFEP18615 380 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 POLR2CP19387 275 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CD82P27701 267 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PRDX3P30048 256 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ATP5DP30049 168 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MSH2P43246 934 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ABCG1P45844 678 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 RAB28P51157 221 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CLCN7P51798 805 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 KPNA2P52292 529 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLTPP55058 493 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PPP1CAP62136 330 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 HSD11B2P80365 405 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MC2RQ01718 297 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FOXM1Q08050 763 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MGAT5Q09328 741 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MGAT2Q10469 447 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 LAPTM5Q13571 262 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FRG1Q14331 258 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 IL11RAQ14626 422 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 TSTQ16762 297 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 TTLL9Q3SXZ7 439 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACSBG2Q5FVE4 666 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 RNFT1Q5M7Z0 435 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLEKHS1Q5SXH7 462 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CATSPEREQ5SY80 951 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 STEAP4Q687X5 459 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 DUPD1Q68J44 220 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLBD1Q6P4A8 553 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF549Q6P9A3 640 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CYB5D1Q6P9G0 228 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CNSTQ6PJW8 725 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CEACAM20Q6UY09 585 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 KIAA0408Q6ZU52 694 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 RNF44Q7L0R7 432 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTAGE6Q86UF2 777 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZFAND4Q86XD8 727 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms