RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 RTL3Q8N8U3 475 aaKnown RBP2.52□□□□□ -2.01
ATM-217ENST00000531957 KLHL30-AS1Q8NEE0 82 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 OR10G7Q8NGN6 311 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 PYCR2Q96C36 320 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 ZNF558Q96NG5 402 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 GTPBP2Q9BX10 602 aaKnown RBP2.52□□□□□ -2.01
ATM-217ENST00000531957 SNX25Q9H3E2 840 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 RIMS4Q9H426 269 aaPredicted RBP2.52□□□□□ -2.01
ATM-217ENST00000531957 CELA1Q9UNI1 258 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 ATRXP46100 2492 aa2.52□□□□□ -2.01
ATM-217ENST00000531957 ZNF840PA6NDX5 716 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 OGTO15294 1046 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 SPRY1O43609 319 aaPredicted RBP2.51□□□□□ -2.01
ATM-217ENST00000531957 SLCO2B1O94956 709 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 SERPING1P05155 500 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 OR52Z1P0C646 297 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 HSPA4P34932 840 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 UBASH3AP57075 661 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 RBBP7Q16576 425 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 ERMARDQ5T6L9 678 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 MFSD4BQ5TF39 518 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 AMIGO1Q86WK6 493 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 ANKRD13CQ8N6S4 541 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 LINC00615Q96LM1 132 aaPredicted RBP2.51□□□□□ -2.01
ATM-217ENST00000531957 PI4K2AQ9BTU6 479 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 PNNQ9H307 717 aaKnown RBP2.51□□□□□ -2.01
ATM-217ENST00000531957 PKD2L2Q9NZM6 624 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 BCCIPQ9P287 314 aaKnown RBP eCLIP2.51□□□□□ -2.01
ATM-217ENST00000531957 IL36AQ9UHA7 158 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 SLC12A6Q9UHW9 1150 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 PLCL2Q9UPR0 1127 aa2.51□□□□□ -2.01
ATM-217ENST00000531957 SYNDIG1LA6NDD5 238 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 TRIM49BA6NDI0 452 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 A8MVM7 634 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 C2CD4DB7Z1M9 353 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 PDHXO00330 501 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 RTCAO00442 366 aaKnown RBP2.5□□□□□ -2.01
ATM-217ENST00000531957 ADORA3P0DMS8 318 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 MYBL1P10243 752 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 NR2F1P10589 423 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 KLK2P20151 261 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 ACHEP22303 614 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 CPT2P23786 658 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 PKLRP30613 574 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 NDST2P52849 883 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 DLK1P80370 383 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 FKBP3Q00688 224 aaKnown RBP2.5□□□□□ -2.01
ATM-217ENST00000531957 CACNG1Q06432 222 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 KIAA0141Q14154 515 aaPredicted RBP2.5□□□□□ -2.01
ATM-217ENST00000531957 ZNF146Q15072 292 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 TTC27Q6P3X3 843 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 REG3GQ6UW15 175 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 ENPP7Q6UWV6 458 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 VITQ6UXI7 678 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 C3P1Q6ZMU1 363 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 PRPF39Q86UA1 669 aaKnown RBP2.5□□□□□ -2.01
ATM-217ENST00000531957 RHOXF1Q8NHV9 184 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 SPPL2AQ8TCT8 520 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 SPSB1Q96BD6 273 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 NEDD4LQ96PU5 975 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 CCDC28BQ9BUN5 200 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 DNAI2Q9GZS0 605 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 ACTL8Q9H568 366 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 JPT2Q9H910 190 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 C3orf14Q9HBI5 128 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 DNAJC4Q9NNZ3 241 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 POLKQ9UBT6 870 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 TSPAN16Q9UKR8 245 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 POMT2Q9UKY4 750 aa2.5□□□□□ -2.01
ATM-217ENST00000531957 RNF123Q5XPI4 1314 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 A0A087WWV3 80 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 A0A087WZ39 114 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 IGHV3-20A0A0C4DH32 117 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 IGHV3-38A0A0C4DH36 116 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 MTMR11A4FU01 709 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 C17orf105B2RV13 164 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 K7ENM7 598 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 TRAFD1O14545 582 aaPredicted RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 ZNF354AO60765 605 aaPredicted RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 MTRF1O75570 445 aaKnown RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 LUC7L3O95232 432 aaKnown RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 EPORP19235 508 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 GIFP27352 417 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 NDUFV3P56181 108 aaKnown RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 ERVK-16P61578 105 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 SRSF9Q13242 221 aaKnown RBP eCLIP2.49□□□□□ -2.01
ATM-217ENST00000531957 BECN1Q14457 450 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 PTGISQ16647 500 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 DUSP5Q16690 384 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 CRY2Q49AN0 593 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 FAM106AQ4KMX7 169 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 LACTB2Q53H82 288 aaPredicted RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 KRT80Q6KB66 452 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 NAA16Q6N069 864 aaPredicted RBP2.49□□□□□ -2.01
ATM-217ENST00000531957 CFAP161Q6P656 301 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 PLPPR4Q7Z2D5 763 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 PIGWQ7Z7B1 504 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 GPD1LQ8N335 351 aa2.49□□□□□ -2.01
ATM-217ENST00000531957 FGFRL1Q8N441 504 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms