RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 IL2P60568 153 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 BBS9Q3SYG4 887 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 PLAG1Q6DJT9 500 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 CAPN13Q6MZZ7 669 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-207ENST00000531727 SLC26A11Q86WA9 606 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 PDSS2Q86YH6 399 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 IGDCC3Q8IVU1 814 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 MFSD9Q8NBP5 474 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 SUN3Q8TAQ9 357 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 SLC13A3Q8WWT9 602 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 NR4A3Q92570 626 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 PLAC1Q9HBJ0 212 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 TEKT2Q9UIF3 430 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 SLC22A7Q9Y694 548 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 IGHV3-20A0A0C4DH32 117 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 A0A1B0GUH1 482 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 PABPN1LA6NDY0 278 aaKnown RBP15.88■□□□□ 0.13
CPSF1-207ENST00000531727 RDH16O75452 317 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 SLC35G6P0C7Q6 338 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 CCR8P51685 355 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 AP1S2P56377 157 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 ZNF33BQ06732 778 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 PDAP1Q13442 181 aaKnown RBP15.88■□□□□ 0.13
CPSF1-207ENST00000531727 ZXDCQ2QGD7 858 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-207ENST00000531727 BTBD16Q32M84 506 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 TEDDM1Q5T9Z0 273 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 DUPD1Q68J44 220 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 ANKRD37Q7Z713 158 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 ABHD11Q8NFV4 315 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 OR4K1Q8NGD4 311 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 OR56A3Q8NH54 315 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 SARGQ9BW04 601 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 TRIM54Q9BYV2 358 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 PPANQ9NQ55 473 aaKnown RBP15.88■□□□□ 0.13
CPSF1-207ENST00000531727 ARL15Q9NXU5 204 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 STMN3Q9NZ72 180 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 SLC17A6Q9P2U8 582 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 CORO1CQ9ULV4 474 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-207ENST00000531727 NAALAD2Q9Y3Q0 740 aa15.88■□□□□ 0.13
CPSF1-207ENST00000531727 OR2W5A6NFC9 320 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 PRAMEF2O60811 474 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 MYBL2P10244 700 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 IVDP26440 423 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 KCNK10P57789 538 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 MORF4L2Q15014 288 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
CPSF1-207ENST00000531727 HECTD2Q5U5R9 776 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 FAM45BPQ6NSW5 357 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 GPATCH11Q8N954 259 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 FAM45AQ8TCE6 357 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 PYCR2Q96C36 320 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 SNF8Q96H20 258 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 ABI3Q9P2A4 366 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 SCN3AQ9NY46 2000 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 POLEQ07864 2286 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 CRYBG3Q68DQ2 2970 aa15.87■□□□□ 0.13
CPSF1-207ENST00000531727 SCN2AQ99250 2005 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 TRBC2A0A5B9 178 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 A8MUI8 341 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 NDUFS4O43181 175 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 ZG16O60844 167 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 RASAL1O95294 804 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 CRYABP02511 175 aaKnown RBP15.86■□□□□ 0.13
CPSF1-207ENST00000531727 TCP1P17987 556 aaKnown RBP15.86■□□□□ 0.13
CPSF1-207ENST00000531727 IL10P22301 178 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 ELK3P41970 407 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 PGGT1BP53609 377 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 MEF2AQ02078 507 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-207ENST00000531727 RHAGQ02094 409 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 HERC3Q15034 1050 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 EXT1Q16394 746 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 HP1BP3Q5SSJ5 553 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-207ENST00000531727 C1QL3Q5VWW1 255 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 H3F3CQ6NXT2 135 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 TRMT10BQ6PF06 316 aaKnown RBP15.86■□□□□ 0.13
CPSF1-207ENST00000531727 GFRALQ6UXV0 394 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 FJX1Q86VR8 437 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 PDIK1LQ8N165 341 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 AFAP1L2Q8N4X5 818 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 DNAJB8Q8NHS0 232 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 M1APQ8TC57 530 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 ATL1Q8WXF7 558 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 FBXL8Q96CD0 374 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 CFAP36Q96G28 342 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 ZNF354BQ96LW1 612 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 OR4K3Q96R72 315 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 OR1F2PQ96R84 312 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 OLFM1Q99784 485 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 LANCL2Q9NS86 450 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 CHMP2BQ9UQN3 213 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 VWA7Q9Y334 891 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 CELSR2Q9HCU4 2923 aa15.86■□□□□ 0.13
CPSF1-207ENST00000531727 CNTRLQ7Z7A1 2325 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ZNF860A6NHJ4 632 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 OR1F1O43749 312 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ENO2P09104 434 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-207ENST00000531727 PWP1Q13610 501 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ABRAXAS2Q15018 415 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 SFT2D3Q587I9 215 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ACER2Q5QJU3 275 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms